Takifugu rubripes (torafugu): 105417119
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Entry
105417119 CDS
T02386
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
105417119
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105417119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
105417119
NCBI-ProteinID:
XP_029701482
LinkDB
All DBs
Position
12:560167..594432
Genome browser
AA seq
2232 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGIGDAPEGGDKRDSDENRERSRSPQNRTPISSFPCNS
HRETLCMESSRIQNTSELEDQHKEGLSEATASPLMDPGRLLTDDKCGRSTVGGSSQNDSG
GSSCSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCSTTGNHGNPPLPPLSLNTG
IINNGSTGSGTDRCVTDSNGNTQSRILLENLQGRATTREMMQGGFIGPTTLLLGGDRERP
GQVEGVRDAEHVPLSPRLRCSSTDTASEHSADLEVVSDTPTQTQMSTHTPSLPDALSDAL
AKGLKNQRVLARQLRRKSDERIEDERNEEEEYSHLVFRAGVVRKVSGEYGCLEVQLNGEK
LLCRYPYRHNTPPGVVDIILDAPPPGVHQIPIGTRVCVPFDNKEGNEGHWQWYREGVVTK
IDTHPAVANRYRVLLSEEKSQPADKEEDGQDTTGGTQAVWVSRQTLRLLVPPWDLDLPFG
GGQDGEVDLRHKEREREEFEEIDVEQEVCRLSRGMTSGVVSVLGRSIAFPGMVPVSSTSG
HSIASPVTSASVFSLVSGQEWEYEKDLKRERDFQRDQERERERERESSAKQQQHLPYMPL
TAEEDMEVSHFNRIPVGAVIPSVKPITVSQHRHIVSKPPPGYVNPQLSVVRGLGIPPAHL
TLNSHPPPSSVLLGVDPASAAAVITVPQLPPLPPISSSTASSSRAEKASGGGSSSSGSVG
GIGSGSGSASSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSREGCSKE
SQRRGYCSRHLSMRTKEMEASGGSRERGGASSTGTLTPSDLRLSGGRASSDFDWDDTSRD
SSEASSRGGDSRPRLVLPSRFDCDECEAATMLVSLGGSRSGTPSFSPISNQSPFSPTPSP
SPSPLFGFRPANFSPISAPTSLTPRRHRQLSGTKMGTPGAERERHLSGIVPTFQTNLTFT
VPMSPSKRKHDIHPPPPLPTVQDGQSKPEQQQLVLGEQILAHSPAAFRVLSPQSQPTTPS
SLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQEPSPRRIVPLRDSPVIVRNPDVP
LAKFSDGPLGRKERNRSREHSQPQHTVPPGLQVPVPINGATTNGAVLLRNPASTLVLVTS
SSSLTSSAVSHATLSTSSIPGSIPNSSSLVLSSSGSGGRERERKPAGHQDPPDGMLPQPV
ACHPTPTSLLPLILPAESPHPAPRKQIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLEPSH
LGGAAQPADGQQLVNQNKEPQCGVALVSDGRTGPADPDRGSPSCPPPSNDNPPTDRGGAD
SETESDADDPFSPGIGNESVPSCGPMKRRTQSLSALPKDGDRKREKDHIRRPMNAFMIFS
KRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYHDLAFQVKEAHFRAHPDWKWCN
KDRRKSLSEGRGTPKEQRQRSMSESIDPHSESQMTEGKGGASGWSGRLEQQGELGQRHRP
RAFSQSAVHTLEQREKERDPEKGECTGVFVQNPLPTCEDVNSDDERMVICEEEGDDDVME
DSCPEGSIDLKCKERVTDSEEDEPYIKQGFQPVARSSHSSSPSEFSSAKGNEGGGGESSD
EDSERKTKRANDGVDGGTKGDDAFTVQTQSPVLQSNMLVPMATGSTPPHPSISLVAPPLP
VQNGPTTASKIIQLTPMPVVQTNVHTNGATTVHSGSSFPVSMATVMAPGAAPPQTVLLTS
PPTRITYVQSAPGVTTATPQQSTTASDAAYLPSSVTTLGFTAIAPAGQTLVQPIVGQPPL
LAPALPITCHSHTSPGQTAGAVARQVLTAIYPTPVATGVVSMTTVPPAVAAPAQDIIRGP
SLDGSTVAPPQAHLALEVKKERHPDRQAEDEGYGASNGVARPPSVTCTLNTIAVKKEEDV
GLHVKKENLSREPQCEMKKTVEKKEIIETDRDDQRDPDNSHRETNSHFPPPAATSLDLIP
PRPAERDPLPSSKKKFRPPPLEKKHNNVGVETNFEERFAELPEFNPEEVLPSPTLQSLAT
SPRAILGSYRRKRRNSTELETSAEDPSSPRRKTRRLSSCSSEPNTPKSAARCDGDIFTFD
RAGMPEGEDLLGDLDRVPCSSLRRTLDQRRALVMQLFQEHGFFPSTQATAAFQARHLDTF
PTKVCLQLKIREVRQKIMQTATPGTHDFGTAGDSSSVPSQSSSTSQSPHKDGGTEQEGDK
SLNTEEPKSEGS
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaataaaaaaacaaggtcggcgctcacctccatccacacgggccaaggggggc
aagcggcgtggaattggggatgcccctgagggaggggacaaaagagactcagatgaaaac
agagagagaagccggtccccacaaaacaggacaccaatatcttcttttccttgtaactca
catagagaaaccttatgcatggaatcaagcagaatacagaatacttcagagttggaggac
cagcacaaggaagggctatcagaggcaacagcttcaccgttgatggatccagggagactg
ttgacggatgataaatgtggaaggtcgactgtgggtggcagcagccaaaatgatagcggt
ggtagcagttgtagtaacagtagtacaccaagcgccaacaatagcccaaatcctgcctcc
agtcggaaaactgccaccttcaaggcccgtgttccaaagaagaagtacacctcggaacac
tgctctactacaggtaaccatggcaatcccccactccctcccctttctctgaacactgga
atcataaacaatgggtcgacaggttcaggaaccgataggtgtgtcaccgactctaatggc
aacactcagagcaggattctcctggagaacttacaaggcagggccacaactagagagatg
atgcagggtggcttcataggacccactaccctgttgcttggcggggatagagaaaggcct
ggccaagttgaaggtgtgagagatgcagagcacgtgccactcagccccagacttcgttgc
tcttcaacagacactgccagtgaacactcagctgacctggaagtagtgagtgacacaccc
acccaaacacagatgtctacacacacacccagtctccccgatgcattgtctgacgccctg
gccaaagggcttaagaatcagcgtgttcttgcccgacaactcaggaggaaaagtgatgag
aggatagaggatgaaagaaatgaggaagaggagtattcacacttagtctttagagctgga
gtagtccgtaaggtcagtggcgaatatggatgcctagaagtgcaactaaatggggaaaaa
ttgctgtgccgttacccgtatcgacataacacccctccgggggtagtagacataattcta
gatgctccaccacctggtgttcatcaaataccaattggcactcgtgtatgtgtaccattt
gacaataaggaagggaatgagggtcattggcaatggtatagagaaggtgttgttacaaag
atcgatacacatcctgcagttgcgaatcggtatagagttttgctatctgaagaaaaatcc
caaccggcggataaagaagaggatggccaagatacaactggtggcacccaggctgtgtgg
gtgtctagacaaacgctccggcttcttgtgcctccttgggacctggatttgccatttgga
ggtggacaagatggagaggtggacctcagacataaagaaagggaaagggaggaatttgag
gagattgatgttgagcaggaggtctgtcgtttgagccggggcatgacatctggtgtggtt
tcggtattggggagaagtattgcttttccaggtatggttccagtttcatctacgtcaggc
cacagcattgcatccccagtaacctctgcctcagtcttcagtcttgtttctggtcaagag
tgggaatatgaaaaggacttaaagagggagagggatttccagagagaccaggaaagggag
agagaaagagaaagggaaagcagtgcaaagcagcagcaacacctcccgtacatgccactc
actgctgaagaagacatggaggtgtcccattttaacaggatcccagtgggggctgtaata
cccagtgtcaagcccataacagtttctcaacatcggcatattgtctcaaagcccccgcct
ggctacgtcaatccccagctgtctgtggtgcggggccttgggatccctcctgcgcatctc
actttgaactctcacccccctccatcatctgtgctgctaggtgtggacccagcatctgca
gcagctgtcattactgtgcctcagctccctcctctccctcccatctcctcttccactgcg
tcctcctccagagcagagaaagcctcgggtggagggtcatctagttctggatcagttggt
ggaattggatctggctcaggttcggcttcctcctcatcatcacgttcccgcactccccta
acagctgcccagcaaaagtacaagaagggagacgtggtgtgcacaccaacaggaatccgt
aagaagtttaatgggaagcagtggaggaggctgtgctctagggagggatgctcaaaagag
tcacagcgccggggatactgctccagacatctttcaatgaggaccaaggagatggaagcc
agtggaggtagtcgagaacgaggtggagccagcagcactgggacactgacaccatctgac
ctccgactgagtgggggaagagccagctcagattttgattgggatgacacatcacgtgac
agcagtgaggccagcagccgtggtggagattctcgccccagattggtccttccctctcgt
tttgattgtgatgagtgtgaggcagcaacaatgctagtttccctggggggttcccgctca
ggtaccccatcattctctcccatctccaaccagtcacctttctcccctacaccatcacca
tctccctctccgctttttggctttcgtcctgcaaatttcagccctattagtgctcccacc
tcgcttactccacgccgtcatcgtcagctaagtggcactaaaatgggtacaccaggggct
gagcgagagcgacacctgtcagggattgtgcccacttttcagactaacctcactttcaca
gtccccatgagcccaagcaagaggaaacacgacatccatccaccccctccactgcctaca
gtccaagacggccagtccaaacctgagcaacagcaacttgtcttgggagaacaaatcctg
gcccatagcccagcagcctttagagtcctttcccctcaaagtcagcccacaaccccctcc
tcactttctttcccccggcctcgtagtgccactagtaggccaccttcctctgccgcctca
acacctccacccatgctggtctctcctactcctccatctccactaccccaggaaccctca
ccacgtcgcattgtacccctacgcgactcaccagtcattgtccgtaacccagatgttcct
ctggccaagttctctgatggcccgttaggaagaaaagagagaaataggtctagagaacac
agtcagccccagcatacagttccacctggcctgcaggtccccgtccctatcaatggggcc
accaccaatggggcagttcttctgcgtaaccctgcatcaacacttgtcttggtcacttcc
agctcgtccctgacctcatctgcagtaagccatgctaccctgtctacctcctccatccct
ggttcaatccccaattcatcaagcttggtcttgtcctcctctggttctggagggagggag
agggagaggaaacctgcgggacaccaagatccccctgatggaatgctaccacagccagtt
gcctgtcacccaacgccaacatctctccttcctctcatactaccagcagagtctcctcat
cctgctccacgcaagcaaatcatcatgggacgaccagggactgtttggaccaatgtggaa
cctcggtctgtgccagtgttcccttggcattctcttgtccctttcctggagccgagccat
ttaggaggggctgcccaacctgctgatggccaacagcttgtcaatcagaacaaagagcct
caatgtggtgtagccctagtgagtgatgggcgaactggccctgcagatccagatagggga
tcaccgtcatgtcctcccccatccaatgacaatcctcccacagacagaggaggggctgac
agtgaaacggaaagcgatgcagatgacccgttctctccaggtataggcaatgaatcggtc
ccctcttgtggtcccatgaaaaggcgcacacagtcacttagtgccctgcctaaagatgga
gacagaaagagggagaaagaccatatccgccgtccaatgaatgcgttcatgatcttcagc
aaacgccaccgtgcccttgtgcaccagcgacatccaaaccaggacaatcggacagtcagc
aagattctgggggaatggtggtatgctttggggcccaatgagaagcagcagtaccacgat
cttgccttccaggtgaaagaggcccactttagagcacatccagactggaagtggtgcaat
aaggaccgtagaaagtccctttcagagggccgtgggacaccaaaagaacaacgacagagg
agcatgtcggaaagtatagatcctcattctgagtctcagatgactgagggtaagggagga
gcttcaggttggtctgggcgattagagcagcaaggagagcttgggcagcgtcaccgtccc
cgagctttttctcagagtgctgtacacaccctggagcaaagggagaaggagagagaccca
gagaagggggagtgcacaggtgtgtttgtccagaatcccctacctacttgtgaggatgtg
aatagtgatgacgagcgcatggtcatttgtgaggaagagggagatgatgatgtcatggag
gattcctgtccagaaggctctattgacctcaagtgtaaagagagagtgacagacagtgaa
gaggatgagccgtatataaagcaaggattccaaccagtggctcgttcttctcactcttcc
tctccctctgaattcagctcagctaaaggaaatgaaggaggaggtggagaaagtagtgat
gaggactctgaaaggaagacaaagagagctaacgatggagtagatggagggacgaaagga
gacgatgcatttacagttcaaacacagtctccagtcttgcagagcaacatgttggttccc
atggcaacagggtctactcctcctcacccttcgatttcccttgttgcgccaccccttcct
gtgcaaaatggacccactacagcaagcaaaattattcagctcactcccatgccagtggtc
cagacaaatgttcacactaatggtgcaacaacagtgcattctgggagctcctttcctgtt
tccatggcaacggtaatggctccgggtgcagcgcccccacagactgttcttctgacctcg
cctcccaccagaatcacctatgtccagtctgccccaggagttaccacggcaacaccacaa
cagtccaccactgcttcagatgcagcctatctcccatcatctgtcacaactctgggcttt
actgccatcgccccagctggacaaacgctggtccaacctatcgttgggcagccaccattg
ttagctccagccctgccaataacctgccattcacatacctctccaggtcagaccgcaggg
gccgttgctcggcaggtactgactgccatctatccgacaccagttgctactggagtggtc
tccatgacaactgtgccacccgctgtagctgccccagcacaagacattatcagaggaccc
tctctagatggctcaactgtggcacctcctcaagctcatttggctttagaggtgaagaaa
gaaagacatccagacagacaggctgaggatgaaggatacggagcgtccaacggtgttgcc
aggcccccgtcggtcacgtgtacacttaataccatagcagttaaaaaggaggaagatgtt
ggattgcatgtgaagaaagaaaatctgagcagggaaccccaatgtgagatgaaaaaaaca
gtggaaaaaaaagaaataatcgagacagacagagatgatcagcgtgacccagataacagc
cacagagagactaatagtcactttccaccaccagcagccacaagtttggacctcattccc
cctcgtcctgcagaaagagacccactgccttcctccaagaagaagttccggcctccccca
cttgagaagaagcacaataacgtaggtgtggaaaccaattttgaggagcgttttgcggag
cttccagaatttaacccagaggaagtcctaccttcaccaacactgcagagtctggccacc
tcacccagagccatcctgggaagctaccgcaggaagagacgcaactccactgagctggaa
acttctgcagaagaccccagttctccgaggagaaagacccgtcgtctctccagctgcagc
tcagaacccaacactccaaagagtgccgccaggtgcgatggagacatcttcacctttgat
agggcaggcatgccagaaggagaggatcttctcggagatttggaccgggttccctgctca
tctctccgtcgaactctggaccagcgccgggctctagttatgcagctgtttcaggaacat
ggcttctttccctcaactcaagccactgctgccttccaggctcgtcatttggacaccttc
cccaccaaagtgtgtctgcagctgaagattcgtgaagttcgccagaagatcatgcagacc
gccactcctgggacacatgactttggaacagcaggagattccagctccgtcccttcccag
agctcctcaaccagtcagtcaccccacaaggatggagggactgagcaggagggagacaag
agcctgaacacagaggagccgaaaagtgaaggatcctaa
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integrated database retrieval system
