Takifugu rubripes (torafugu): 105419859
Help
Entry
105419859 CDS
T02386
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105419859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
105419859
03036 Chromosome and associated proteins [BR:
tru03036
]
105419859
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105419859
Coactivators
SAGA/TFTC/STAGA complex
105419859
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105419859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
105419859
NCBI-ProteinID:
XP_029697450
LinkDB
All DBs
Position
9:complement(15166799..15178050)
Genome browser
AA seq
965 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGDRKAPAAPYSEEKREGAPAAGSQFSGK
VRDQVGSLEQPQQGHPKAGLNQKPGADESLPGKTLPSSTSTVAPGAAPTAAASLPTVAAP
PAAPTAPGPVTLNTPSAASFHRAAVLGPSAAPSTTIVPVGDSTRTASPGLQSLNGGPGGV
KLGNSAPAPPAAGANTVISTVSAGGSTIIVSMASQPTFPVPQSQVTSGTLQRHPSPVTSV
AQNGVDPKGAQLVAQCSASPSAPAAQTNPSLHPKMLLPSQPPPGGSVILTNTPPPAAEQP
PVGQPQVDTKPAVNGVAQQPPVAVVRPPGSPVVATSVQQQRPGLVASSPRVAAPQPQLAV
RPQQQTTIQLPSGFTIPPGMVLVRTETGQLIMVPQQVLAQAQAKLQQGQTVANITQRPAT
PTATTAIRVSTATTAPQTVRLATPSQPRMVQPPSTSTVQAIAVAPGGAEVSKMTSAPTAQ
TVMAAGGMPLAKPAVNPSAPQSSTPAAAPAPAASRVTVVSQEMQENVKKCKNFLATLIKL
ASHNSPSPDTSKNVKALVQDLLDAKIEPEEFTSRLQAELKSSPQPYLIPFLKKSLPALRQ
SLLSSQQSLVTPPTPPLAAPGSVTATTIRPRVPISPVGATVRLNTPLTSTVAVGRTGVQT
VQTRTPVVFSQTIRPQGSIVRGPTTIIGKSPVHLAVQANQKKPSDPGGGTFRDDDDINDV
ASMAGVNLNEESARILATSSELVGTKIRSCKDESFLPAGLLHRRILDTAKKLGVSEVPLE
VVNFISHATQSRLRSLLEKVSAVAQHRTDGGKDEECCEQTSDVRSQLRFFEQLERIEKQR
KDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKK
RKLDSPGGAAAGTEVGGGGGPSVPGSSRQQLRQRITRVNLRDFIFCLEQDRSTARSMLLY
KALLK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtggatgagaaagca
gttagcgacctagttggctctctggaatcccaactcggcgaccgaaaggctcccgctgca
ccatattccgaggagaaaagggagggagctccggccgctggcagccagttctcagggaaa
gtgcgcgatcaagtggggtctctggagcagccgcaacaagggcatccaaaagcggggtta
aaccagaaacccggcgccgatgagtcgctccccgggaaaactctcccttcgtctacctcc
accgtcgctccgggggccgcgccgaccgccgccgcgagtctcccaacagttgcggcgcct
cccgctgctcccaccgcgccgggacccgtaactttgaacactccgtcggcggctagcttc
catcgggctgccgtcctgggtccgagcgcggctcccagcaccacaatcgtccccgtcggg
gactcgacacggaccgcttctcccggactccaaagtttaaacggcggtccaggaggtgtg
aagttggggaactcggctcctgcccccccagcagccggggccaacacggtgatcagcact
gtcagtgcaggcggctccaccatcatcgtgtccatggcttcacagcccactttcccggta
cctcagtcccaggtgacgtctggtactctgcagagacacccgagcccggtcacgagcgtc
gcccagaatggtgtggaccccaagggcgcccagctggtggcgcagtgctcagcctccccc
tcagcccccgccgctcagaccaaccccagcctgcaccccaagatgttgctgcccagccag
ccgccccctgggggctcggtcatcctgaccaacacccctccgcccgcggccgagcagccc
cccgtgggccagcctcaggtggacaccaagcctgctgtgaacggcgtggcccagcagccc
ccggtggccgtggtccggcccccgggctcccccgtggtggccacctcggtgcagcagcag
cgccccgggctggtggccagctcgcccagggtggccgccccccagccccagctggcggtg
cggcctcagcagcagaccaccatccagctcccgtcgggcttcaccattcctccaggtatg
gttctggtccggactgagacgggccagctgatcatggtcccacagcaggttctggcccag
gctcaggccaagctacagcagggtcagacggtggccaatatcacccagcgacccgccacc
cccacagccaccaccgccatccgggtcagcaccgccactacggctcctcagactgtccgc
ctggccaccccctcccagcccagaatggttcagcctccctccaccagcacagtgcaggcc
atcgcggtggctcctggtggtgcagaggtgtccaagatgacctccgctccgaccgcccag
acggtgatggcagcaggcgggatgcctttggccaagcctgccgtcaacccttccgcccct
cagagcagcacgccggccgctgcccccgctccagcggcaagtagagtcacggtggtgtcc
caggaaatgcaggagaatgtaaagaaatgcaagaacttcctggccacactcattaagctg
gcatcgcacaactccccctccccagatacctccaagaatgtgaaggccctggtgcaggac
ctgctggatgcaaagatcgagcctgaggagttcacctctcggctgcaggctgagctgaag
tcctccccacagccctacctcatccccttcctgaagaaaagcctccccgccctgcgccag
tctctgctcagcagccagcagtccctggtgaccccccccacgccaccgctggctgccccc
ggctcggtcaccgccaccaccatacgcccccgggtgcccatcagtccagtgggcgccacc
gtcaggctgaacacgccgctcacgagcaccgtggctgtaggaaggacgggagttcagacc
gtacagactcgcaccccggtcgtcttcagtcagaccatcagacctcaaggttcgatcgta
agaggtcccacaactataattggcaaaagtcctgttcatctggcagttcaagccaatcag
aagaagccaagtgacccagggggcgggacattcagagatgatgatgacatcaatgatgtg
gcgtccatggcaggcgtcaaccttaatgaggaaagtgcccgtatcctagcaaccagctct
gagctggtgggcacaaagatccgctcctgtaaagacgagtccttcctcccagccggcttg
ttacaccgccgcatcctggatacagctaagaagctgggagtgagcgaggtgccgctggag
gtggtcaacttcatctcccacgccacccagtccaggctgcgctcgctgctggagaaggtc
tccgccgttgctcagcaccgcaccgacggggggaaggatgaagaatgttgcgagcaaacg
tcagacgttcgctctcagcttcggtttttcgagcagctcgagcgaatcgagaaacagaga
aaagacgaacaagagcgagagatcctgttgaaggctgcaaagagccgggccagacaggaa
gaccctgagcaggctcgcctgaagcagaaggctaaagagatgcagcaacaggagttggct
cagatgcgccagcgggacgccaacctcaccgccctcgccgccatcgggccacgcaagaaa
cgcaagctggactctccgggtggagctgcagcgggcacagaggtgggcgggggcggcggc
ccctccgtgccgggctcgtcccgtcagcagctgcgtcagcggatcacacgagttaacctc
agggacttcatcttctgtctggagcaggaccgctccacggctcgctctatgctgctctac
aaggcgctgctgaagtga
DBGET
integrated database retrieval system
