Takifugu rubripes (torafugu): 115252039
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Entry
115252039 CDS
T02386
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115252039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tru03009
]
115252039
Ribosome biogenesis [BR:
tru03009
]
Eukaryotic type
Pre-60S particles
GTPases
115252039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115252039
NCBI-ProteinID:
XP_029702123
LinkDB
All DBs
Position
13:complement(1455957..1480318)
Genome browser
AA seq
1162 aa
AA seq
DB search
MEKITALQKNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSREDEQI
RGITMKSSAISLHYRHGAEEYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVLDAVEGVCP
QTQAVLRQAWLENIKPVLVINKMDRLIVELKLTSQEAYSHLQKILEQVNAVTGTLFTSRV
LEERAEKEQKEEPLPGGDPLYDWSAGLEEVDDSHLYFSPDQGNVVFASAIDGWGFSIQQF
AQIYSQRMGINPQVLLRTLWGDFYLHAKAKKILKGAQTKGKKNLFVQLVLDNIWSLYDAV
VTRRDQEKVDRVMSSLGVKVAARDLRHSDPKVLLSAICSQWLPVSQAVLSMVCEKLPSPL
DMTAERVEKLLSVGARGFEALPEETQQLKQAFLECSSREDAPAIIFVSKMFAVDARMLPQ
NRPRPLTQDQIAQRRDAARQRHAERMMAAPEGHKDPSPSARPAAEDPSPSARPAAEDLSP
SARPAAEDLSPSARPAAEDLSPSARPATEDLSPSARPAAEDLSPSARPAAEDLSKAISED
LALKDSRTPQGEDQKEVFIAFARVYSRTVRKGQKVFVLGPKYDPAKGLSLLQGGPSSSPD
VPHLSCCSLDKLYLLMGRELEELEEVPAGNILGIGGLDDYVLKSATLSSTPACSPFTPLN
FEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEVHLQRCL
DDLRERFAKIEISASEPIIPFRETLVRPPKVDMVNEDLGKQQKVAIIHQVKEEASQARSE
TLHLDPTGLVTLTTPNRLSTISVRAMPLPQEVTQLLEASTELIRTLEQLNMSLREGKHVD
VNARTLESLSGLKGQLENLLQGWKWRDAVERIWSFGPRRYGPNILLNSVEGYQRPSVWQV
LARAETGAGEGAVLREFDNSVVSGFQLAALSGPMCEEPLMGVCFSVERWDVQPSALPQHR
GLPEDRSGPHTLMGEAEDEAAQVRRRQQEGASADCYRPVSGQLMAGVKEACRRAFLAQPQ
RLMAAMYTCEIMATADVLGRVYGVLGKREGRVLHEEMKEGTDMFIIKALVPVAESFGFAD
EIRKRTSGLASPQLVFSHWEVISSDPYWVPTTEEEYLHFGEKADSENQALKYMNSVRRRK
GLYVEKKLVEHAEKQRTLSKNK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatcaccgccctgcagaaaaaccctgccaacatcagaaacctgtgtatcctg
gcccatgtggaccacggtaagaccacgctggcggactgcctggtggccagtaacgggatc
atctccagcagactggcggggaagctgaggtacctggacagcagagaggacgagcagatc
aggggcatcaccatgaagagcagcgccatctctctgcattaccgccacggagcggaggag
tacctgctgaacctcatcgactcccccggccacgtggacttctcctctgaggtgtccaca
gctgtgaggctgtgtgatggggccattgtggtgctcgatgctgtggagggagtgtgtcca
cagacccaggctgtcctacgccaggcgtggctggagaacatcaagccggtgctggtcatc
aacaagatggaccgcctcatcgtggagctgaagctcacatcccaggaggcctacagtcac
ctgcagaagatactagagcaggtgaacgccgtgacggggacgttgttcacgtctcgagtg
ctggaggagcgtgcagagaaggagcagaaggaggagccgctccctggaggagacccgctt
tatgactggagcgctggcctggaggaggtcgacgactcccacctctacttttctcccgac
caaggaaacgtggtgtttgcgagcgccatcgatgggtggggcttcagcatccagcagttt
gctcagatctacagccagaggatgggcatcaacccccaggtgctgctcagaaccctgtgg
ggggatttttacctccacgctaaagccaagaagatcctgaaaggagctcagacaaaaggg
aagaagaatctgtttgtgcagctggtgcttgacaacatctggagtttatatgatgctgtt
gtgaccagaagagaccaggagaaggtggacagagtgatgtcatcactgggcgtgaaggtg
gcggccagagacctgcgacactccgacccaaaggtcctcctctctgccatctgtagccag
tggttacctgtttcccaggcggtcctttcgatggtgtgtgagaagcttcccagcccctta
gacatgacggccgagagggtggagaagctgctgagtgtcggagctcgagggtttgaggct
ctgcctgaagagacccagcagctcaagcaagctttcctagagtgttccagccgggaggac
gctccggccatcatctttgtgtccaagatgtttgctgtggatgccaggatgttgcctcag
aacaggcccagacccctgactcaggatcagatcgcacagcggcgagacgcagcgagacag
agacacgcagagaggatgatggccgcaccagagggacacaaagacccgtctccctctgca
cgtccagccgccgaggacccgtctccctctgcacgtccagccgctgaggacctgtctccc
tctgcacgtccagccgctgaggacctgtctccctctgcacgtccagccgctgaggacctg
tctccctctgcacgtccagccaccgaggacctgtctccctctgcacgtccagccgctgag
gacctgtctccctctgcacgtccagccgctgaggacctgtccaaagctatttcagaggat
ctggctctgaaagactccaggacgccgcagggagaagaccagaaagaggtcttcattgcg
tttgcccgagtttacagcagaacggtcaggaaaggacagaaggtctttgttcttggaccg
aagtacgacccggccaagggcctgagtctgctgcaggggggccccagcagttcgcccgat
gtgcctcatctctcttgctgctccttggacaagctgtacctgctgatgggcagagagctg
gaggagctggaggaggttcctgctggaaacatcctgggcatcggcggcctggacgactac
gtcttgaagtcggccacgctgtcgtccaccccggcctgctcgcccttcacgccgctcaac
tttgaagccacgcccatcgtgcgcgttgccatagaacccaagcatccaagcgagatgcca
aagctggtgcgtgggatgcgtctcttgaaccaggccgatccatgtgctgaggttctcatt
caggaaacgggagaacatgttctggttactgccggtgaagttcatctccagcgctgcctg
gatgacctcagagagcggtttgctaaaattgagatcagcgcgtcagaacccatcattcca
ttcagagagacgctggtgcgtcctcccaaagtggacatggtgaacgaagacctgggcaag
cagcagaaggttgctataatccaccaggtgaaagaggaggcgtcccaggcccgttctgag
acgctgcacctggaccccaccgggctggtgaccctcaccactcccaacaggctgtccacg
atcagcgtgcgagcgatgccgctgccacaggaggtgactcagctattggaggccagtacg
gagctgattcgcactctggagcagctcaacatgtctctgagagaggggaagcacgtggac
gtcaacgccaggactctggagtccctcagtggactcaaaggccagctggagaacctgctg
cagggatggaagtggagggacgccgtagagcggatctggtcctttgggcctcgaagatac
ggtccaaacatcctgctgaacagcgtggaaggctaccagcggccctccgtgtggcaggtc
ctggcccgggcggagacgggggccggcgagggcgctgttttacgggagtttgacaacagc
gtcgtcagcggcttccagctggccgcgctgtcgggacccatgtgtgaggagcccctgatg
ggggtgtgcttctctgtggagcggtgggacgtccaaccgtcagccctcccacagcaccgg
gggctcccagaggacaggtcgggaccgcacactctgatgggtgaagccgaagatgaggcc
gctcaggtgcggcgccggcagcaggagggggcctcggcagactgctacagaccggtctct
ggacagctgatggcaggtgtgaaggaggcgtgtcgacgggccttcctggcccagccccag
aggctcatggccgccatgtacacctgtgagatcatggccactgccgacgtgctgggtcga
gtgtacggcgtcctgggcaagagagaaggtcgagtcctccatgaggagatgaaggagggg
acggacatgttcatcattaaagcgctggtccctgtggccgagagcttcgggttcgccgac
gagatccgcaagagaaccagcgggctggccagtccccaactggtcttcagccactgggag
gtgatcagcagtgacccctactgggttcccaccacagaagaagagtacctgcactttggg
gagaaggcagactctgagaaccaggccctcaagtacatgaacagcgtgcggcgccgtaaa
ggcctctacgtggagaagaagctggtggagcacgcggagaagcagaggacgctgagcaag
aacaaatag
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