Takifugu rubripes (torafugu): 115253331
Help
Entry
115253331 CDS
T02386
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04010
MAPK signaling pathway
tru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115253331
04020 Calcium signaling pathway
115253331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tru04040
]
115253331
Ion channels [BR:
tru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115253331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
115253331
NCBI-ProteinID:
XP_029707008
LinkDB
All DBs
Position
17:complement(9981735..10026012)
Genome browser
AA seq
1711 aa
AA seq
DB search
MTNGSASVGGLCVNWNQYYTRCHTGHSNPHKEAINFDNIAYAWIVIFQVITLEGWVEIMY
YVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSST
LASEPGDCYEELFQLVCHILRKARRQTVILFNTLRGKPRGFRGVGRGRGGKRRERKANGR
EGRQRAAMRRHAAPCPHHNKPDHTSPMALTSASVRDGCPQCATALSLSDGVGPVCTEKDE
ADDGAVEETDGEGVSSSNKEKRREGAANHKGCCPRRTCKDIWYGTRVKLWEIVESKYFNR
GIMIAILINTISMGIEHHEQPEELTNVLEICNIVFTSMFSLEMILKLTAFGSFNYLRNPY
NVFDGVIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVAT
FCMLLMLFIFIFSILGMHIFGCKFSIKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWN
VVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSNSDDDRSSSN
FDESEKHDSIKLSDPRICTLTPNGHLELGGCSSSRGSYSSERRSVTVDSRKSSVMSLGKS
SLERRSLSLRHGRSSNYHNWGRPLPPHSGWSRRSSSNSLGRRSYGFGGAPLVGGSLRVRS
SCSPQSYPYSAEQESLLTHPSHSHHPLSKHHPPPPLLLSRHFARRRDRRALSLELPELLR
AGGQPPGHPPFHPDTGRKSGCGAGGSVTGGSGIGSGLGGGHRDCNGKTPGIHTRLMSEVF
PQVNARKDRADLDEETDYSLCFRIQKMIEVYKPDWCETREDWSVYLFSPQNGFRLLCQSI
IAHKLFDYVVLVFIFLNCITVALERPKILQGSVERVFLTISNYIFTTIFVAEMTVKVVSM
GLYLGEKAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISR
APGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGFDVKNITNKSD
CLAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPITNNNPWML
LYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLP
YYASYGPARLAIHTLCTSHYLDLVITFIICINVITMSLEHYSQPRSLETALKYCNYVFTS
TFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIESNASLPINPTIIRIMR
VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNA
DYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGGSGSDYSCHAGLQF
ISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIEMELAQGGLCCMMG
GIGAIAGATGSAVSGAGAGAAGAVGGPGATSDEGGGGGAHEGLAQRRCRLFSPALESQWL
DSVSLLIKDSLEGDMIDNLSGSVFHHYSSPPVCKDCRSHPQEQIKLAEVEQASLMSEQLS
DKSSSLALPDDLSLDEHSNYQLLVRDSQQGSSDSHSSEELPASGGYRGLRRCSSGSEDGD
HETFEEGIQAEVDTLSPACCAGPLPDGDGRSCGADAGGSSPLFRTPAEVIHPSAAAHPGG
PEDTSSPRDREPPQLASLPPSSAHLDQTANP
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgggagcgccagtgtgggagggctgtgtgtcaactggaaccagtactacacc
aggtgtcatactggacacagcaaccctcacaaagaggccatcaactttgacaacattgcc
tatgcctggatcgtcatatttcaggtcatcaccctggaggggtgggtggagatcatgtac
tatgtaatggacgcacactccttctacaacttcatctacttcattctgctgattattgtg
ggttctttcttcatgattaacctgtgcctcgtggtcatcgccacccagttctcagagacc
aagcagagagagcaccagctgatgcaggagcagcgagcacagtgtttgtcctcctccacc
ctggcgagcgagcccggagactgctacgaggagctcttccagcttgtctgccacatcctg
cgcaaagccaggaggcaaaccgtcattctgttcaacaccctgcggggaaaacctcgcggg
ttccgcggcgtcgggagaggaagaggaggaaaaaggagggagcggaaagccaatggaaga
gagggccgtcagagggctgcaatgaggagacatgctgcaccctgtcctcaccataacaag
cctgaccacacttcacccatggccctcacctccgcctccgtcagagacggctgcccccag
tgtgccacggccctttcgctctccgatggagtcggtccagtttgcaccgaaaaggatgaa
gcggacgatggagccgtggaggagaccgatggggagggggtttcttccagtaacaaagag
aagagacgggagggcgccgcaaaccacaagggctgctgccccaggagaacatgcaaggac
atttggtacggcacccgggtgaagctgtgggagatcgtggagagcaaatacttcaacaga
ggcattatgatcgcaattctcatcaataccatcagcatgggcatagagcaccacgagcag
ccggaggaactcaccaatgtcctggagatctgcaacatcgtcttcaccagcatgttctcc
ttggagatgatcctcaaactgacagcctttggctctttcaactacctgaggaacccctat
aatgtctttgatggagtgattgtcattataagtgtgtgcgagattgttggccagtccgac
ggaggtctgtctgtgctgaggaccttcaggctgctcagggtcctgaagctggtcaggttc
atgccggccttgaggagacaactagtggtgctcatgaagaccatggacaatgtggccact
ttctgcatgctgctcatgctcttcatcttcatcttcagcattctcgggatgcacatcttt
ggctgtaagttcagtatcaaaacagagacgggggacacggtaccggatcggaagaacttt
gactctctgctctgggccattgttactgttttccagattctgacgcaggaggactggaac
gtggttctgtacaacggtatggccgccacgtcaccactagctgctctttactttgtggcc
ctcatgacttttggcaactatgtcctgtttaacttgctggtggcgatcttggtggaagga
tttcaggcagagggagatgctaaccgctccaattccgatgacgaccgctcttcttccaac
tttgatgaaagtgagaagcacgactcgataaagctgtctgacccgaggatctgcacactg
acaccaaatggccatctggagctaggcggctgttctagttccagggggtcctactcttca
gagaggcggagcgtcactgtggactcgaggaagagcagcgtgatgagcctcggcaagagc
agcctggagagacgctccctttctttacgtcatggccgcagttccaattaccacaactgg
gggcgccctctccctccacattcaggatggagtcgcaggtccagctcaaacagtctgggt
cggaggagttacggctttggaggggctccacttgtaggaggaagtctgcgcgtgcgcagc
agctgctccccccagtcttacccctattccgcagaacaagagtccctcctcactcatcct
tcccactctcaccatcctctatccaaacatcacccgcccccacctctgctgctgtccaga
cactttgctaggaggagggatcgacgggccctttccctggagctcccagagcttctccgc
gctggaggacaacctccaggtcacccacccttccacccagatactgggaggaagagcggg
tgtggtgccgggggctctgtcaccggaggctctgggattggaagtggactgggagggggg
caccgggattgtaatggcaagacgccgggtattcacactcggctgatgtctgaggttttc
ccacaggtcaacgcgcgtaaagatcgtgcagatctggacgaagaaacagattatagtttg
tgcttccgcatccagaagatgatagaggtgtacaagcccgactggtgtgagaccagagag
gactggtccgtctacctgttttccccacaaaacgggttccggctgctctgccagtccata
atcgcccacaagctctttgactacgtggttctggtctttatctttctcaactgcatcacg
gtggccctggagaggccgaagatactccaaggcagtgtagagagggtgtttctcacaatc
tccaactatatcttcaccaccatctttgtggctgagatgaccgtcaaggtggtgtccatg
ggtctctacctgggggagaaagcctacctcaggagcagctggaacatcctggatggtttc
cttgtcttcgtgtccctcattgatatcgtggtgtccatggcgggcggagcaaaaatcctg
ggagtcctccgtgttctcaggctgctcaggacgctgcgccccctcagggtgatcagcagg
gcaccaggactgaagcttgtcgtggagacactcatcacatccctcaagcccatcggcaac
atcgtcttaatctgctgtgccttcttcatcatctttggcattcttggtgtccagctcttc
aaagggaagttttactactgcgtgggcttcgacgtgaagaacatcaccaacaagtccgac
tgtctggctgccaattaccgatgggttcatcacaaatacaacttcgacaacctcggacag
gctctcatgtccctgtttgtactggcctcaaaggacggctgggtcaacataatgtaccac
ggcctggatgctgtgggaattgaccagcagcccatcaccaacaacaacccatggatgctg
ctctattttatctccttcctcctcattgtcagcttctttgtcctcaacatgtttgtgggt
gttgtggttgagaacttccacaagtgccggcagcatcaggaggtggaggaggccaagaga
cgggaggagaaacgtcagcggcgcatggagaaaaagaggagaaaggcacagaagctgccc
tactatgcctcttacggtccagcccgactggccatccataccctgtgcaccagccactac
ctagacctggtcatcaccttcatcatctgcatcaacgtcatcaccatgtctctggagcac
tacagccagccccggtctctggagacggcgctcaagtactgcaactacgtcttcacctcc
acctttgtgatcgaggcctcactgaagctcgtggctttcggcttccggcgcttcttcaag
gacaggtggaaccagttggacctggccattgtgctgctgtcagtgatgggtataacccta
gaagagatagagagcaatgcctccctccccatcaaccccaccatcatcaggataatgagg
gtactcaggatagcacgagtgctgaagctgctgaaaatggccactgggatgagagctctg
ctggacaccgtggtccaggctctgcctcaggtgggaaatctcggtctgctcttcatgctg
ctctttttcatctacgcagctcttggagtggagctctttggagagctggtgtgtaacgct
gactacccctgtgagggaatgagccgccacgccacctttgagaactttgggatggctttc
ctcacactcttccaggtttccactggtgacaactggaatggcatcatgaaggacaccctg
cgagaatgcccaccgggtggttcagggagtgactacagctgccacgcagggctgcagttc
atctcccccttgtactttgtgtcttttgtgctgacggcgcagtttgtcctgatcaacgtc
gtggtggcagtgctcatgaaacatctggacgactccaacaaggaggcgcaggaggatgca
gagatggatgccgagatcgagatggagctggcacaggggggcctctgttgcatgatgggg
ggcattggtgccatcgctggggcgacaggcagtgctgtgagtggggccggcgctggtgca
gccggggcagtcggaggtccgggcgcgacatcagatgaaggaggaggtggtggagctcac
gagggactcgcgcagcgtcgatgtcgactcttctctccagctctggagagccagtggttg
gacagtgtgtccctgttaattaaggactccttggaaggggacatgattgacaacctctct
ggttccgttttccatcactacagttctcctcctgtctgcaaggactgcaggagccaccca
caggagcagattaaactggcggaggtggagcaggcatccctcatgtcggagcagctgtcc
gacaagtcgtcctctctggcgctgcctgacgacctgagtctggacgagcacagcaactac
cagctgctggtcagggacagccagcagggcagcagtgactcgcacagctcggaggagctg
ccagcttccgggggctacagaggcctccgccgctgcagctccgggagcgaggacggggac
cacgagacgtttgaggagggcatccaagccgaggtggacacgctgagcccagcgtgctgc
gcaggaccccttccagatggagatggacggagctgcggtgcagacgctggtgggtcttca
cctttgttccgcacaccagcggaggtcatccacccatcagctgccgctcacccgggtggc
ccagaggacaccagtagtcccagagacagagagcctccccagctggcttcactgcctccc
tcctccgctcacctggaccaaactgccaacccttga
DBGET
integrated database retrieval system
