Tropicibacter oceani: QF118_06245
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Entry
QF118_06245 CDS
T09169
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
try
Tropicibacter oceani
Pathway
try00300
Lysine biosynthesis
try01100
Metabolic pathways
try01120
Microbial metabolism in diverse environments
try01230
Biosynthesis of amino acids
Module
try_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
try00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QF118_06245 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
try01002
]
QF118_06245 (dapE)
Enzymes [BR:
try01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
QF118_06245 (dapE)
Peptidases and inhibitors [BR:
try01002
]
Metallo peptidases
Family M20
QF118_06245 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WGW05140
LinkDB
All DBs
Position
complement(1310647..1311792)
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AA seq
381 aa
AA seq
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MTPIDPVDLTARLVRCPSVTPEEGGALVLLQDLLEGAGFTCTRVDRNGTSNLFARWGDKG
AAKTFGFNGHTDVVPIGNPEDWTFDPFGAEIDGGFLYGRGSTDMKSGVAAFAAAAVDFVR
GTPPDGSIILTITGDEEGDATDGTVALLDWMKDQGEQMDVCLVGEPTSPDFMGQMMKIGR
RGSLSAWFTVQGQQGHSAYPHRALNPLPAMARLMDRLASHTLDEGTEHFDASTLAIVTID
TGNPATNVIPAQTRACVNIRFNDAHSGATLSDWLRDEAAKVDKAFGTTTSLKIKISGESF
LTPPGALSDLVGAAVQAETNQVPELSTTGGTSDARFVKDHCPVVEFGLVGKRMHAVDERV
EVAQVHQLKAIYTRILRSYFA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccattgaccccgtcgatctgaccgcccgccttgtccgctgcccttcggtgacc
cccgaagagggtggcgcgcttgtcctgttgcaggaccttctggaaggcgccgggttcacc
tgcacccgggttgatcgcaacggcaccagcaacctgttcgcgcgctggggcgacaagggc
gcggccaagacctttggctttaacggccataccgacgtggtgccgatcggcaaccccgag
gattggacctttgaccccttcggcgcggaaatcgacggcgggttcctgtacgggcgcggc
tcgaccgacatgaaatccggcgtcgccgcctttgccgccgccgccgtggatttcgtgcgg
ggcacgccccccgacgggtcgatcatcctgaccatcaccggcgacgaagaaggcgacgcc
accgatggcaccgttgcgctgctggactggatgaaggatcagggcgaacagatggatgtc
tgccttgtgggcgaacccaccagccccgatttcatgggccagatgatgaagatcgggcgg
cgcggttccctgtccgcctggttcaccgtacagggccagcagggccattccgcctatccg
caccgcgcgctgaatcccctgcccgccatggcgcggctgatggatcgccttgccagccat
accctcgatgaaggaaccgagcatttcgacgcctcgaccctggccatcgtgaccatcgac
accggcaacccggcgaccaacgtgatcccggcgcagacccgcgcctgcgtcaatatccgc
tttaacgacgcccattccggcgccaccttgtcggactggctgcgggacgaggccgccaag
gtcgacaaggcgtttggcaccacgaccagcctgaagatcaagatttccggcgaaagtttc
ctcaccccgcccggcgcgctgtccgatcttgtcggcgcggcggtgcaggcggaaaccaac
caggtgccggaactgtcgaccaccggcggcacatcggacgcgcgttttgtcaaggatcat
tgcccggtggtcgaattcggccttgtgggcaagcggatgcacgcggtcgatgaacgggtc
gaggtcgcgcaggtgcatcagctgaaggcaatctacacccgcatcctgcgcagctatttt
gcatga
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