Thiothrix subterranea: HMY34_00040
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Entry
HMY34_00040 CDS
T07831
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00630
Glyoxylate and dicarboxylate metabolism
tsb01100
Metabolic pathways
tsb01110
Biosynthesis of secondary metabolites
tsb01120
Microbial metabolism in diverse environments
tsb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMY34_00040
Enzymes [BR:
tsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
HMY34_00040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QQZ27272
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Position
9447..10826
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AA seq
459 aa
AA seq
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MDQSGRYSDLSLKEEDLIAGGKHILVAYKMMPQPGHGYLEAAAHFAAESSTGTNVEVSTT
DDFTKGVDALVYYIDEATEDMRIAYPLDLFDRNITDGRMMVVSMLTLIIGNNQGMGDIKH
AKIHDFYVPERAIQLFDGPSKDISDMWRILGRPVVNGGYIAGTIIKPKLGLRPEPFAAAA
YQFWLGGDFIKNDEPQGNQVFCPAKKVYPLVYDAMKRAQDETGQAKLFSANITADDHYEM
CARADFILEAFGPDADKVAFLVDGFVGGPGMITTARRQYPNQYLHYHRAGHGMITSPSAL
RGYTAFVLAKLSRLQGASGIHVGTMGYGKMEGENSDKNIAYMIERDECQGPVYFQKWYGM
KPTTPIISGGMNALRLPGFFENLGHGNVINTSGGGAYGHIDSPAAGAISLRQSYECWKAG
ADPIEFAKEHKEFARAFESFPGDADKIYPGWREKLGVHK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatctggacgttattcagacttaagtttgaaagaagaagacctgatcgctggc
ggcaagcacattctggttgcttacaaaatgatgccacagccgggtcacggctatttggaa
gcggctgctcactttgcagcagaatcttctacgggtactaacgttgaagtgtctaccacc
gatgatttcaccaaaggcgttgacgcgctggtgtactacatcgacgaagccactgaagac
atgcgtatcgcgtatccattggacttgtttgaccgcaacatcaccgatggtcgtatgatg
gtcgtgtctatgttgacgctgattatcggcaacaaccaaggcatgggcgacatcaaacac
gccaaaatccatgacttctatgtgcctgagcgtgctatccaattgttcgatggtccatcc
aaagacatctctgacatgtggcgtattctgggtcgtccagtggttaacggtggttacatc
gcgggtacaatcatcaagcctaagctgggtctgcgccctgagccattcgcggcggctgct
taccagttctggcttggcggcgacttcatcaagaacgatgaaccgcaaggcaaccaggtt
ttctgcccagcgaaaaaagtttacccactcgtatacgacgccatgaagcgtgcgcaagac
gaaaccggtcaagcgaaactgttctctgcgaacatcaccgctgacgaccattacgaaatg
tgcgctcgtgctgatttcatcctcgaagcgtttggcccggatgcggacaaagttgccttc
ttggttgacggtttcgtcggcggccctggcatgatcactaccgctcgtcgccagtaccct
aaccaatacctgcattatcaccgcgcaggtcacggcatgatcacttcgccatcggcactg
cgtggttacaccgcgtttgtattggcgaaactgtctcgtctacaaggtgcttccggtatc
cacgtcggcacaatgggctacggtaaaatggaaggcgaaaacagcgataaaaacatcgcg
tacatgatcgagcgtgacgagtgccaaggcccagtctacttccaaaaatggtacggcatg
aagccaaccacgccaatcatctctggcggtatgaacgcgctgcgtctgccgggcttcttc
gagaacttgggtcacggtaacgttatcaacacttccggtggtggtgcttacggtcacatt
gacagcccagcggcaggtgcaatttccttgcgtcaatcgtatgagtgctggaaagcgggt
gctgacccaatcgaatttgcgaaagagcacaaagaatttgctcgcgcattcgagtcattc
cctggcgatgcagacaagatctacccaggctggcgcgaaaagctgggcgtacacaagtaa
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