Terrihabitans soli: IZ6_12110
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Entry
IZ6_12110 CDS
T07468
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tso
Terrihabitans soli
Pathway
tso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IZ6_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_12110
Enzymes [BR:
tso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IZ6_12110
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IZ6_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF2256
Motif
Other DBs
NCBI-ProteinID:
BCJ90476
UniProt:
A0A6S6QM89
LinkDB
All DBs
Position
complement(1165517..1166146)
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AA seq
209 aa
AA seq
DB search
MPLQPSHDCPLCPRLVSFRTKWRKEAPDWHNAPVPSFGPEDAELLIIGLAPGLQGANRTG
RPFTGDWAGDLLYATLLDFGFAKGVYDERPDDGLQLVRARIVNAVRCVPPENKPTGPEIN
TCRKFLIDEFDTLPKVKAMVLLGRIAHDSTLKTLGVKATDAKFGHGAEHQVGKIRLFDSY
HCSRYNTNTGRLTNEMFRAVFSAVRSYLG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
ttgccgctccagccctcacacgactgcccgctctgcccgcggctcgtctccttccgcacc
aaatggcggaaagaggcgccggactggcacaacgcgcctgtgccgagtttcggcccggaa
gacgccgagcttctgatcatcggcctcgcgcccggccttcagggcgccaaccgcaccggc
cgccccttcaccggcgactgggcgggcgatcttctctacgcgacgctgctcgatttcggc
tttgccaaaggcgtctatgacgagcggcccgatgacgggcttcagctcgttcgtgcgcgc
atcgtcaatgcggtgcgctgcgtgcccccagaaaacaagccgaccggccccgagatcaat
acgtgccgcaaattcctgatcgacgagttcgacacgctgccgaaagtcaaagcgatggtg
ctgctcggccgcatcgcccatgacagcacgctgaaaacgctcggcgtcaaagcaaccgac
gccaaattcggccatggcgccgaacaccaggtgggaaaaatccggctcttcgacagctat
cactgctcgcgctacaacacgaatacggggcgtcttacgaacgagatgttccgcgcggtg
ttcagcgccgtgcgcagctatctcggctaa
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