Trichinella spiralis: Tsp_00603
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Entry
Tsp_00603 CDS
T01609
Name
(RefSeq) pancreatic alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00500
Starch and sucrose metabolism
tsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Tsp_00603
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Tsp_00603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
10901925
NCBI-ProteinID:
XP_003376440
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MLKKRIAVEASIIPQIYDEEATVVSAEPSASGQFSFFREVRNEYSPLGPMVKWTPTMQRR
ANIKPTVVRETSSACERKGRVSTVRLCLHCSKIKLALKIKKANYTLKQWFSKCGLRSTGG
SSADSGHTGKDIKKKQLVNQDVCLDQILVLFFAYSMQKHFTRLIAWLLLVVHWQVVIGDG
DKVSDDCFDELQTDPRRPVAVHLFEWKWTDIANECETFLKDTGIGLIQVSPPNEHAVFEH
KGDYSWWLRYQPVSYLLHSRSGTEKEFIDMVQRCMKVGIKILVDGVINHMVGANMKGCGS
GGSSYNSTPFKESFPAVPYGPSDFNDNICNHDIKNYDNAAEVRNCRLVSLVDLKLSKVEV
QQKIADYLNHLIDIGVAGFRIDAAKHMWPDDIRNILKRVNHLNPAYYPKDKCAFVFHEVI
DQGAEAIQGSEYVDFGRITNFRYGLDLSAAVMRNENFLYFKNFGPEWNYWKSHDVLVFVD
NHDNQRGSGGGGKVLTYKTPKMYKLAVSFMLAWNYGIPRLMSSYYFNGHDMGPPSFGRPD
FKTKSPTFTPDGLCNQSSGWVCEHRWHEIKRMTLFSASVAGLPNTNIISDHHRIAFSRGS
NGFYALNNDPHNAWVVQVQTSLPAGFYCDFMTGSVTNKGCSGKTIEVTTDGKVKLVVEPE
TAVAISVASKLTLPPSYKRTVVLIHFPTIEGQNVFIRGGVHSSHRKGCKTDVIDTPCSIP
IIHIEDVQSSWKKFIHWRSDDYFLDWSTGDNAEGSSTIGTPLAWSTNIKNQVGYQWENKY
GEHYWFMNVLMDCNRTESGWFEFQSAMDSSNLVESAIKQTKCNGDGGVAEPPFTTTFHAA
RCGFVNVFQFNTSACTIEKRLSMQYIAMLLSFTVIIVIIHAHETDAAVMHFCFTNQIIVN
LVILRLSVLIFCGIHFLFIAFYDVILNICYDSGVVMVAFVLMRNEGNSTHVYIVYM
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaagcggattgctgtagaagcgagcatcatcccgcaaatttatgatgaagaa
gccacagtcgtctccgctgagccatcagcatccggccagttttcattctttagagaagtc
aggaatgaatacagcccccttggacccatggtcaaatggaccccaacaatgcaacggagg
gctaatatcaagcccactgtagtacgggagactagttcagcttgtgaacgcaaagggcgt
gtttcaacagtcaggttgtgcttgcattgtagcaaaatcaaattagcattaaaaattaaa
aaagcaaactatactctaaagcagtggttctcaaagtgtgggttgcgatccactggtgga
tcatcagcagattctggacatacgggcaaggacataaagaaaaaacagctggtcaatcaa
gatgtctgtctggaccaaattttggttctcttcttcgcttactctatgcaaaaacacttt
actcggttgattgcctggcttctgctagtggttcattggcaggtggtcatcggcgatgga
gataaagtttcagatgattgcttcgacgaattgcaaacggatcctcgccggcctgtggct
gttcatcttttcgaatggaaatggactgatattgctaatgaatgtgaaacatttttgaaa
gatacaggcatcggcttaattcaagtgtcaccaccaaatgaacatgctgtatttgagcac
aaaggtgattactcatggtggttacgatatcagccagtttcatatctgctgcacagtaga
agtggcactgaaaaagaattcatcgacatggtccaacgatgtatgaaagttggaatcaaa
atactagtcgatggtgtcattaatcacatggtcggtgcaaatatgaaaggatgtggttct
ggcggttcttcttataattctacaccatttaaagagtcatttccagctgtgccttatggt
ccaagcgattttaatgacaatatatgcaatcatgatattaaaaattatgacaatgctgcg
gaagtgcgaaattgtcgtttagtatcactggtagacttgaaactgtcaaaagtggaagtt
caacagaagattgctgactatttgaatcatttaattgatataggagttgcgggatttcgc
attgacgctgccaagcatatgtggcctgatgacattcgaaatattctcaagcgagtgaat
catctcaatccagcatattatccaaaagataaatgtgcttttgtcttccacgaagttatt
gatcaaggtgcagaagcaatccaaggttctgaatatgtcgattttggacgcattactaac
tttcgctacggattggacttgtcagccgctgtgatgcgaaatgaaaattttttgtatttt
aaaaattttggaccagaatggaactactggaagagtcatgatgttcttgtttttgttgac
aatcatgacaaccagcgaggaagcggaggaggaggaaaagttctcacttataaaactcca
aaaatgtacaaattggccgtcagctttatgctagcatggaattatggaattccaagactg
atgtccagttattattttaatggtcatgatatgggtccaccttcatttggaaggccagat
tttaaaacaaaaagtcctacattcactcctgatggtttatgtaatcaatcaagcggttgg
gtttgtgaacatcggtggcatgaaatcaaaagaatgacactttttagtgccagtgttgct
ggtttgccgaacacgaacataatttctgaccatcatcggatagcattttctcgtggtagt
aatggcttttatgctttgaacaatgatccacataacgcttgggtggtgcaagttcaaacg
agtcttccagcgggattttattgtgactttatgactgggagtgtaacaaataaaggatgt
tcaggtaaaactatcgaagttacaacggacggcaaagtgaagctggtcgtagaaccagaa
actgctgtagcaatcagtgttgcctcaaagcttacattgccaccatcttataaaagaact
gttgtattgatacactttcccacaatcgaagggcaaaatgtatttattcgaggaggagtc
cattcttcacacaggaaaggctgcaaaacagatgtgatcgacactccttgttccattcca
ataatacatattgaagacgtacaatctagttggaaaaaatttattcactggagaagtgat
gattatttcctcgactggtcaactggtgataatgcagaaggctcttctactattggaaca
ccgttagcttggtcgacaaacattaaaaatcaggtcggctatcaatgggagaacaaatac
ggagagcattattggtttatgaatgtactgatggattgtaatagaactgaaagcggttgg
tttgaatttcagtcagctatggattcgagcaatttagtagaaagtgcaataaagcaaacc
aaatgcaatggtgatggcggtgtagctgagccgccttttactactacttttcatgcagct
cgttgcggttttgtaaatgtttttcaatttaacacttcagcttgcacaattgaaaagaga
ctctcaatgcagtatattgctatgttactttcattcactgttattatagtcattattcat
gctcacgaaacagatgcagcagtcatgcatttctgttttactaatcagatcattgtaaat
cttgtaatattgcggttatctgtattaattttttgcggcattcattttttattcattgca
ttttatgacgttatactaaacatttgttatgactcaggagttgtgatggtagcgtttgta
ttaatgagaaatgaagggaattcaacgcacgtttatatcgtttatatgtaa
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integrated database retrieval system