Trichinella spiralis: Tsp_02575
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Entry
Tsp_02575 CDS
T01609
Name
(RefSeq) Sec23/Sec24 trunk domain protein
KO
K14007
protein transport protein SEC24
Organism
tsp
Trichinella spiralis
Pathway
tsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tsp_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02575
Membrane trafficking [BR:
tsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
Tsp_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
10898868
NCBI-ProteinID:
XP_003378901
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MKRQVPCAIKEYCMTHMAFNPPPPSIYSSNMHIPPDVPVFSGSNVSLQNGMNGSLPVVAY
VMYFEEGKNDGNQAQNYSRNDYSSNEQSAFTVQQATADFQRMKLNVDSTFSSTQQHPPPP
IPTVVSPNVGYPSNFNYDGTTATASFLSAPMVSVLPPQPDTPAAPPVMNSAATGPSSQML
RSGFPSNFANYGPPSAGFAPPTANHPSTPVMHPVNVIPEDRVSMSQQSEELMPSTMDGKF
NSPLQQPLVFHGPNMPLAAQSNYSASSIPPPPMLSQPSSMPPMCPADFPSMQRLPMRQST
TTLSPPPQSSGFSGVPTQSPFSPPSDFSKNAVPGAPPTGCSMNQYPPMPSAPMPGQNFSH
GTSSPFPPTDGQTGAYLPGGLPPQPQMPANSQPKRLDPNLMPSAIQVFEDDRKTKAGLFQ
TGVDHAELPPLCTTEFYAEDQGNSNPKFIRSTMYSVPVSSDLLKNSALPLAFCVTPLAKL
CPEENPLPVVNFGDLGPIRCHRCKAYMCPFMVFFDGGRRFRCPFCNTSTDVANEYFSHLD
HASRRIDMMERPELHLGSYEFVATKEYCKDQLFPNPPAYVFVLDVSYNAIRNGLNLPKEH
GKDCMIEVAFITYDQGVHFYDLKNGSGSPKMMVVNDVQEMFVPMGKGLFVKPSVASQAID
QLMEQIWSLFGENRITEVILGPALQAGVEALKAHNRSGKVFLFHTTLPTFEAPGKLKNRE
DRRLLGTDKEKTILTSQSDFYAKLSEECRSVGCGVDLFLFPNSFIDVATVGEICRLTGSQ
MYKYPYFEANKDGDRFLADLKHAIERPVVFDAIMRLRTSTGLRPVEFYGNIAMNNRTDIE
MATVDSDKCVTIEVKHDDKLEGGNAYFQVAVLFTSVSGERRLRIHNLALSVAMDYAAMYR
SADVLTILNYLAKFAERHQMQKTPKEVRESLTSRVAQILATYRQYCSPNSSLGQLVLPEL
LKILPLLVNSLLKSDAFSGGSELTVDDRAWLMQLLPSMSPLDSVLYFYPRLTPLVKLELL
NESPPAVRCSYENLLPDEAYLLDNGVLMFLWIGQSVPTQWIQDVFGVPTFAQINTDKNQL
IEKDNPTSRSLRCWIEELQAGRQRRAKIYIIKQGEKLEPWMKKFLVEDRNDNCPSYVDYL
CYIHKEIRSYIS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcaagtaccatgtgcaatcaaggaatactgtatgacacatatggcatttaac
cctcctccaccttcaatctattcatcaaatatgcacatcccacctgatgtacctgtgttt
tctggttcaaatgtatcacttcaaaatggaatgaatggttcattgccggtcgtagcatat
gttatgtattttgaagaaggaaaaaacgatggtaatcaggctcagaattacagtcgaaat
gattattctagtaatgaacagtctgcatttactgtgcaacaggctacagctgattttcaa
cgtatgaagttgaacgtggattctacatttagttcgacacagcagcatccacctcctcct
atacctactgttgtatctccaaatgttggttatccatcgaattttaattatgatgggaca
acggcaactgcgtcatttttgtctgctccgatggtaagcgttttaccaccgcagccagat
acccctgctgcgccacccgttatgaattcagcagctacaggcccatcatcgcaaatgtta
cggtctggtttcccttcaaattttgcaaactacggaccacctagtgctggttttgcacca
cctactgcaaaccatcccagcactcctgttatgcatccagtgaatgtcattccggaagac
agagttagcatgtctcaacaaagtgaagaactgatgccatctacaatggatggcaaattt
aactctcctttgcagcaaccgcttgttttccatggtcctaatatgccattagccgcccaa
tccaactacagtgctagttcaattccacctccaccgatgttatcacaaccgagttctatg
ccacccatgtgtcccgctgactttccttcaatgcagcgattaccgatgagacagtccact
actactctatcacctccgccacagtcttccggtttttctggcgttccaacccagtcaccg
ttttcgccaccatctgatttttccaaaaatgcagtaccaggtgcacctcctactggatgc
agtatgaatcagtatcctccgatgccaagcgctcctatgccagggcagaatttttcacat
ggaacttcgagtccttttcctccgactgatggtcaaaccggcgcgtatttacctggaggt
ttgcccccacaaccgcagatgcctgcaaattcacaaccgaaacgtttggatccaaattta
atgccaagtgcaatacaagtttttgaagatgatcgaaaaactaaggcagggcttttccaa
actggcgttgaccatgctgaactaccacccctgtgcacgacagaattttacgcagaagat
caaggaaatagtaatcccaaattcattcgatccaccatgtacagtgttcctgtgtcaagc
gatttgttgaaaaacagcgcattgccattagcattctgtgtaacaccattggccaaactg
tgcccagaagagaatccactacctgttgtaaattttggtgacttggggcccatccgttgt
catcgttgtaaggcatacatgtgcccatttatggtgttctttgatggcggcaggcgattt
cgatgtccattttgtaacaccagcactgatgtggcaaatgaatatttttcacatcttgat
catgctagtcgccgaatagatatgatggaacggcctgagctgcatttaggatcatatgaa
tttgtggctactaaagaatactgcaaagatcagttgtttcctaatcctccagcatatgta
tttgtgttggatgtatcgtacaatgcgattcgaaatggtcttaatttacccaaagagcat
ggaaaagattgtatgatcgaagttgcttttattacttacgatcagggtgttcatttctat
gacttgaaaaatggtagcggttcaccaaaaatgatggtagtgaatgatgttcaagagatg
ttcgtacccatgggcaaaggactatttgtgaaaccttccgtggctagtcaagctatagat
caattgatggaacaaatttggagtttatttggagaaaatcgtattactgaagtgattctc
ggacctgctctgcaagctggggtggaagctttgaaagcacacaatcgatctggcaaggta
ttcttgtttcacacaacattacctacgtttgaagctcccggaaaattgaaaaatagagaa
gatcgtcgtttgttgggcacagataaagagaaaactattctgacttcgcagagtgatttt
tatgcgaaattatccgaagaatgccgttctgttggttgtggggtggatttgtttctgttt
ccaaattctttcattgatgttgcaacagttggagaaatatgccgcctcacaggtagtcag
atgtacaaatatccatactttgaggcgaataaagatggtgatcgttttctggcagatttg
aagcacgctattgagcgtccagtagtattcgacgcaattatgcgattgagaacaagcaca
ggcctccgtcctgttgaattttacggcaacatagcaatgaataacagaacggatatagaa
atggctactgttgattcagacaaatgcgtgacgattgaagtgaaacatgacgataaactt
gagggtggaaacgcatattttcaagtagcagtattgtttactagtgtaagtggagaacga
cgattgcgcattcataatttggcattgtcggttgctatggactatgcagctatgtatcga
tcggcggatgtgctcacaattttgaattatttggcgaaatttgctgaacgacatcagatg
cagaaaacgcccaaagaagtgcgcgaaagtttgacatcaagagtagctcagattttggct
acatatcgtcagtattgctctccgaattccagtttgggacagttagtgttgcctgagctg
ttgaaaattttaccactgcttgtaaatagtttgttgaaaagtgatgcattttctggaggt
tctgaattaactgtggacgatcgtgcttggctaatgcaactcttaccatcgatgagtccg
ttagattccgtactgtatttttatcctcgtcttacaccgctggtgaagctggaattatta
aacgaatcgccacccgcagttcgttgttcttacgaaaatttattacctgatgaggcgtat
ttgcttgacaatggtgttttaatgtttttatggattggtcaaagtgtgccgacccagtgg
attcaggatgttttcggcgtgccaacttttgcccagataaatactgataagaaccaactg
attgaaaaggacaatccaacgtccagatcgttgcgttgttggattgaagagctgcaagct
ggtcgtcaacggcgtgcaaaaatttacataattaaacaaggggaaaaattggaaccttgg
atgaagaaatttcttgttgaagatcgaaatgataattgtccatcttatgttgattatctt
tgctacattcacaaagaaattcgcagttatattagctga
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