Trichinella spiralis: Tsp_02767
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Entry
Tsp_02767 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K13217
pre-mRNA-processing factor 39
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_02767
Spliceosome [BR:
tsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
Tsp_02767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
10899388
NCBI-ProteinID:
XP_003379096
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MDSISESYCYSRSGGSESDERASGIESSPRRYNSRRRSSERRSRKRSRRSAHRLEKHHRR
SRSDRRHHSSRSRSGSSRRKRRKYSSSERSDSDERSSARRAHKHVDESTNRSVQHNGEHD
VDAHAKALTYYWAKVDNDPNNFENWMRLLSYVEKANDIEAVRLSFDTFLARYPLCFGYWT
KYACLELKNHNEEKCIQVYERGVSVIPLSVDLWMSYIDFLKRYEQSEEQLRALRTLIDNH
HPEELLCEEEYRTVFNNTCRMLKAKNIKALTKPAIADLRLRIKESREKLFEELHTAVNRR
LPFENRISRPYFHVKPLERSQLDNWKKYCEFEIREGNRERIQVLFERCLIACAMYEEMWI
MYANYMETVSDVETRQIYSRACQTHYLSRKPNIHLSWAAFEERHGNFDEAAHVLDSYEKM
SPGNIMIAIRRLGLERRQLLSNPANDATTDCGSLCALYERFINNETLDLKVRSFYAIKYA
RFQLKQSIELYLQLVDLAYARQPFNLDLLLQTLDRAIASPDLPDSVKLQFSQRKMTALED
FSPDVAAIQSHYEAHMQFQNLVKENDKDKAATPRNGPPIENKMLPRIPGNNPYPSYFNYY
YQNQPQYPSPMIAGQIPPHQWNAHYGNYMYPPNMWILPIFDEKTIFMSNSSACTDLSHSF
LHMLCLARIELKSNSVMSNDAIHSYYVNVYILNASNQSLTRTSRGML
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggactcaatctctgaaagctattgttattctcgatctggcggcagtgaatcggatgaa
agagcaagtggaatagaatcatcgccgagacgttataacagtagaagaagatcgtcagaa
cgcagaagcaggaagcgatccagacgcagtgcgcaccgtttggaaaagcatcacagacga
agtcgaagtgacagaagacaccacagtagtagaagtcgcagcggaagttccagaaggaag
aggaggaagtattcctcatcggaacgttctgacagtgatgaacgaagcagtgcaagacgc
gcacacaaacatgttgacgaaagcactaacagatcagttcaacacaacggagaacatgat
gttgacgcacatgcaaaagctttaacctactactgggccaaagtcgacaatgatccgaat
aactttgagaattggatgcgccttttaagttatgtagaaaaagctaatgatatagaagcc
gtgcgattatcgtttgatactttcttagctcgttatccactgtgctttggctattggaca
aagtacgcgtgccttgaattgaagaatcacaacgaagagaaatgcattcaagtatatgaa
cgtggtgtatcagtaattccactgagtgtggacctatggatgagttacattgactttctt
aaacgttatgaacagtccgaagaacagttaagagctttgcgcacacttatcgataatcac
caccctgaagaacttctctgcgaagaagaatatcgcactgttttcaacaacacttgtcgg
atgttgaaagcgaagaacattaaagctttgaccaagccagcaattgctgatctacgctta
agaatcaaagagagccgagaaaaactgtttgaagagttgcatacggctgtgaacagacgc
ttacctttcgaaaatagaataagtcgaccgtacttccacgtgaaaccgctggaacgttcg
cagttggacaactggaaaaagtattgtgaatttgaaattcgtgaaggcaatcgagaaaga
attcaagtattgttcgaacgttgcctgatagcctgcgccatgtacgaagaaatgtggatt
atgtacgcgaattatatggaaacggtcagcgatgtcgaaacgcgccaaatctattccaga
gcatgtcaaacacattatttgtccaggaaaccgaacatccatttatcctgggcagcattc
gaagaaagacatggcaatttcgatgaagctgcccacgttttggattcgtatgaaaaaatg
agtccaggaaatataatgatagcaattcgtcgacttggattggaacgtcgtcaattgttg
tctaatcctgcaaacgacgccactactgactgtggtagtctttgtgcgttgtatgaacgt
ttcatcaacaacgaaacgcttgatttgaaagtgcgttcgttttatgctatcaaatacgcc
agatttcagctaaagcaaagcattgaactgtacctgcagctggtcgatttagcatatgct
agacaaccgtttaatttggatttgttgcttcaaacgttggatcgagcgatagcttctccc
gaccttccagactcggtgaaattgcaattttctcaacgtaaaatgacagctctggaagat
ttcagtccagacgttgcagccattcaaagtcactacgaggctcacatgcaattccaaaat
ctcgtgaaagaaaatgacaaagataaagctgccacgccaagaaatggcccacccatagag
aacaaaatgttgcccagaattcccggaaataatccttatccatcttattttaattattat
taccaaaatcaaccgcaatacccgtcgcccatgattgctggacaaatacctcctcaccaa
tggaatgcacattacggcaactacatgtatcctcccaatatgtggattttgcccattttt
gatgaaaaaaccatttttatgtcgaattcctctgcttgcacagatttatcccattctttt
ttgcatatgttatgtctagctcgaattgaactgaaatctaatagtgtaatgagcaatgac
gccatccacagctattacgtaaatgtctacattctgaacgcatcaaatcaatcattgaca
cgcacgtcacgtggaatgttgtga
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