Trichinella spiralis: Tsp_05515
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Entry
Tsp_05515 CDS
T01609
Name
(RefSeq) putative PHD finger protein 10
KO
K22197
BRG1-associated factor 45A
Organism
tsp
Trichinella spiralis
Pathway
tsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Tsp_05515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_05515
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
Tsp_05515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
PHD_2
Prok-RING_1
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
10913336
NCBI-ProteinID:
XP_003371871
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MRKESPLEPGFARVGDPPSIPLPDSALQKTDNHATYIYAGYPVEYAWPVGSQNTYMVEKE
VIQFLGVTNFKERYPNLHRHNIVAEEYEYLLSNLRCGTKTFDEELIALKTVEVLKLMSGD
FPGKFTLTRGEEEVISMENLNAEKGKLDKFAEQRKCLVKKAAVQNMELNQDRMTKRRKFF
DIQTMILQEPVRRMSPKRDVLVNAYPVRVMHSQKTIVPPQVAREWVDRMPYMKGPTVIME
IGRSSSPETITVTSNEISAEAVADKASAMSDRNKAISNLTRKSEGKLLNRGELTGESCAF
CGNDLHTKDQYVQCSKCGSCVCAEHRPRHISCMDMSLEMYAITRQYDWMCMECKPCSVCS
NLDDEDQMLFCDRCDRGYHTYCVGLSKPPSGRWQCQKFCSVEENKQQDFRAYMQGAASTS
YDSIKVKDEPLRCADCSVVMSKNELHKWKRRTLKTEVLCSQCNRRRRYGD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagaaagcccattggaaccgggatttgccagagtcggcgatcccccttctatt
cctcttcccgacagtgctttgcagaaaacggataatcatgctacgtatatatatgcagga
tatcctgtcgaatatgcgtggcctgtcggttcgcaaaatacttacatggtagaaaaggaa
gttatacaatttcttggtgtgacgaatttcaaggagcgatatccaaatctacaccggcat
aatatagttgcggaagaatatgagtacttattatctaacttgcgttgcggtacaaagact
ttcgatgaggaattgattgctttgaaaactgtcgaagtccttaaattgatgagcggtgat
tttccgggaaagtttacgttgacacgcggtgaagaggaagtgatctctatggagaacctt
aatgcggaaaagggaaagttggacaaatttgctgaacagagaaagtgcttggtgaaaaaa
gccgctgtgcagaatatggaactgaaccaagatcgaatgacaaaacgacgaaaattcttt
gatattcaaacaatgattctgcaagagccggttcgacggatgtctccaaagcgcgatgtg
cttgtcaacgcttatcctgtgcgcgtcatgcattctcagaaaacgattgttcctccacaa
gttgcaagagaatgggttgatcgaatgccgtacatgaagggacctacggttattatggaa
ataggtcgctcttcttctccagaaacgatcactgttacctcaaatgaaatttcggccgaa
gcggtggctgacaaagcgtcagcaatgtcggaccgtaataaagcaatttccaacttgacc
aggaaatctgaagggaagttattaaatcgtggagagcttaccggagaatcatgcgcattt
tgcggaaatgatctgcatacgaaagatcaatatgttcaatgttcgaagtgtgggagttgt
gtttgcgcagaacatcgtccaaggcatattagttgtatggacatgagtttagaaatgtat
gcaattacaaggcagtacgattggatgtgcatggaatgcaaaccttgctcagtgtgctct
aatttggatgatgaagatcagatgttgttttgtgatcgttgtgatcgaggataccatacg
tattgcgtcggtttgtcaaagccacccagtgggcgttggcagtgccagaagttttgttct
gttgaagaaaacaagcagcaggatttcagagcatatatgcagggtgccgcttctacttct
tacgacagtatcaaagtgaaagatgagccgcttcgttgcgctgattgcagtgtagtgatg
agcaaaaacgagctgcataaatggaaacggcgtactttgaagaccgaggtgctttgttct
cagtgtaatcgtcgacgtcgttacggtgattga
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