Trichinella spiralis: Tsp_11174
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Entry
Tsp_11174 CDS
T01609
Name
(RefSeq) putative Low-density lipoprotein receptor domain class A
KO
K20053
very low-density lipoprotein receptor
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_11174
Membrane trafficking [BR:
tsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
Tsp_11174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
Motif
Other DBs
NCBI-GeneID:
10913604
NCBI-ProteinID:
XP_003372138
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
METKHDCPSDHFRCHLDGKCIPLTWVCDSHPDCVDGSDELSNMCVKHPCNETEFSCKNER
CIPKEWECDRDDDCGDNSDEHDKCSYHCDPKSFQCVESGKCIPYDYVCDGQMDCSDRSDE
MNCKQHMTKLLSEQHGCRAHEFQCHDGACISERFVCDGDVDCPDMSLNNCSALHFRCASG
KECIPSVYRCNGRADCADGSDEKNCASESVGEVKHCSAKQFDCGNGFCIDWDVVCDGKQD
CPGYKVVDEEPFLNCSLKGTDFCKEKPCEQLCTNTPIGPQCSCRPGYTVSLTNPKQCNDI
NECNTAGKCSQICINTIGSYVCKCHGDYVLLNNKRSCRANGPQAKLLLTNRLSIRQFGLI
SLTPEMLVNNLNSVVAIDYSYKRRLLFWSDISKEQIFSTTSTIMGIMGIFGLCRCQFGND
FHAVNASDCERPIISNNVSSPDGLAVDWIHDLIYWTDTGLDTISVATLDGKLRHTLIHDG
LDEPRAIAVDPSCGMMFWTDWGVSPKIESAAMDGTNRFAIDRDALLGRREVEANLLVQLL
RPGQEGHFEQQKSHLPSVQCFGFRRDPLLDRLEFRRGPHGQQIYRRKQSSPVERDVRPDD
CQNFPSLENKCENSECAHLCVPSMKIAAGQTVPAKMITNIKPYVCLCSDGYSLHANARDC
VAKGATTTGDDNGKKTNSNADASTTITTATAGDGDDGQGKAFAKQEEQSTPVKTSSSKAG
MVLALLFTLSAIVGAVSWFVWKQRPLNVHFGQFFCLSYPFCRRGQDHYDHLRLTLDNEEY
QSGTLISGTGSGIYQPTVKSNIGDVEDGGTALAESPMTTTIQRGIPLA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacatgattgtccttctgatcattttcgatgtcatctggatggcaagtgt
attccattgacttgggtttgtgacagtcatccggattgtgtcgacggttcggatgagctg
tcgaacatgtgtgtcaagcatccttgcaacgagactgaattttcgtgcaaaaatgagcgt
tgtattcccaaagaatgggaatgcgatcgtgacgacgattgtggtgacaactccgatgag
catgacaaatgcagctatcattgcgatccgaaaagtttccaatgtgtcgaaagtggcaaa
tgcataccgtatgattatgtgtgcgatggtcagatggattgttcagatcgttcggacgag
atgaactgcaaacagcacatgacgaaattgttgtccgaacagcacggctgcagggcgcat
gaatttcaatgtcacgacggtgcttgcatcagtgaacgtttcgtatgcgacggtgacgtc
gactgcccggatatgagtttgaacaattgttcggctttacatttccgttgcgcttccggt
aaagaatgtatcccgtctgtttaccgttgcaatggtagagcagactgtgcagacggatca
gacgagaagaactgcgcttcagaatcagtcggcgaggtgaaacactgcagtgctaaacag
ttcgactgtggcaatgggttttgcatcgattgggatgttgtgtgcgatggaaagcaagat
tgtcccggttataaggtggtcgacgaggagccatttttgaactgttcgttgaaaggcacg
gatttttgcaaagagaaaccttgcgaacagctgtgcaccaacacaccgatcggtccgcag
tgttcctgtcgtccaggctatacggtgtcgttgaccaatcccaaacaatgcaatgatatc
aatgaatgcaacactgccggcaaatgttcccaaatttgcatcaacacaatcggcagctat
gtttgcaaatgtcacggtgattatgtgcttttgaacaacaagcgcagttgtagagcgaac
ggtccacaggcgaaattgttgttgaccaatcgtttgagcattcgacaatttggactcatt
tcgctcactccggaaatgttggtcaacaatttgaattccgtagtcgctattgattattcg
tacaaaaggcgtctgctgttttggtccgatattagcaaagagcagatattttccaccact
agtacaataatgggaataatgggaatatttggtctttgtagatgccaatttggcaatgat
ttccacgcggtaaatgcatccgactgtgaacgtccgattattagtaacaacgtctcgtca
ccggatggtttggcagtggattggatacacgatttgatttactggaccgatactgggttg
gatacaatttcggtggcaacgttggacggcaaattgcgtcacacgttgattcacgacggt
ctcgacgagccacgtgcaattgccgttgatccatcgtgcggtatgatgttctggactgat
tggggtgtttcaccgaaaatcgaatcggccgcaatggacggtacgaatcggttcgcaatt
gaccgagatgctctactgggtcgacgcgaagttgaagcaaatctgctcgtccaactactt
cggccaggacaagaaggtcattttgaacagcagaaatcgcatctaccatccgttcagtgt
ttcggttttcgaagagaccctctactggaccgattggaattccgaaggggtccacatggc
caacaaatttaccggcgaaaacaatcgtcccctgttgaaagggatgttcggcctgatgac
tgtcaaaattttccatccctggaaaacaagtgcgaaaacagcgaatgtgcccatttgtgc
gtgccgtcgatgaaaatagccgccggtcaaacggtacccgcgaaaatgatcaccaacatt
aaaccgtacgtctgtttgtgcagcgacggttacagcttgcatgcgaatgccagggactgt
gttgccaaaggtgcaactacgacgggagatgataatgggaaaaagacaaatagcaacgct
gatgcttcgacgactattactactgctactgctggtgatggtgatgatggtcagggaaaa
gcgtttgccaagcaagaagaacagtcaacacctgtaaaaacttcaagttccaaagctggt
atggttctggcattgttgttcacattgtctgcaattgtgggcgcggtgagctggtttgtg
tggaagcaacgaccgttgaatgtacattttgggcaatttttttgcctgagctatccgttt
tgtcgacgtggccaagatcattacgatcatttgcgcttgactttggacaacgaagaatac
caatctggcacgttgatttccggtaccggttccggcatttaccagccgactgtaaaaagc
aacattggtgacgtggaagacggtggtacagctttggccgaatctccaatgacgacgacc
attcagaggggcatccctctggcttga
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