Trichinella spiralis: Tsp_12292
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Entry
Tsp_12292 CDS
T01609
Name
(RefSeq) putative protein tag-76
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tsp
Trichinella spiralis
Pathway
tsp04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
Tsp_12292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_12292
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_12292
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Tsp_12292
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Tsp_12292
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Tsp_12292
microRNA pathway
RISC loading complex
Tsp_12292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL2
PAZ
ArgoN
ArgoMid
ArgoL1
Motif
Other DBs
NCBI-GeneID:
10910674
NCBI-ProteinID:
XP_003366655
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MCEQIHEPHLISATVEQFLITELLLGQDTNVAADELLQLRLRHGYGTVGKPIKLACNYFP
LIKLQKGDIMVNRYHIDIQHPRLKLNWFDFNLLSMKRSDISRDPFKLAYDGKSTLFTVDK
LHLKQVGEEADTEKFSFKTARENKPSELSILIKFTGLVHLDFRNAEAGSLDERKKGPIQF
LDILFAQGRSSPIFDLSKSFKAVRNSFYCIPQGAGADMKYGIELWRGLFISARVIDGFRP
AINIDGVMEIVSHSCFYKRQSLINLICDILNGDEREVKFHPNQLRLDTRLQPEQLSLLIP
ELKGVSIHTTHRNQDRIYRIKDILSTAVSMKFKRDGKEVSVAEYFRDVYGPLKYPNLPLL
CQVANCQRYNKKLKACQTTSIIRFASTDAPTRNLKCIDMVKKSNFNSDPFLKSFGVQIKA
EPMIVDGRVLPPPRLEYGKGNGGRQIILTPKDGAWNSNEFKFFESAYCESFGFVSFLPPH
KASMLQEFCLQIVRTCRSTGIEMPDSPKFYEQARKNDTVEMVFKRIADKCDRDGIKCDLV
FVALFSSEQYAQVKSCGDITFGLVTQCVLPKTISDVAVKNSYSTMLNIAMKINMKIGGIN
TKLLEDENNALVIGVDVVHPSAVETHLPSIASVVGNVDANVTKFHASVKIQPAKQELITG
FIEQFSDRLLEYVDVNGTALKNIIVYRDGVSEGQFMQVLEEELPALRRACKSFATNYRPL
ITFIVVQKRHHARFFCCDEAAARGRGKNIPAGTVIDRVVTSPNEYDFFLCSHHGIQGTSR
PTRYHVLLDESNMDANAMQSVTYYLCHLYGRCARSVSIPAPVYFADLVCARARYHVLAAL
NSGLVEKFSDEDSNSSSSSSSSSSSS
NT seq
2599 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaacaaattcatgaaccgcatcttatttcagcaactgttgagcagtttttgatc
actgaattacttttaggccaagatacgaatgtagctgcagatgaattgttgcagttacgt
ttacgacatgggtacgggactgttggcaagccgataaaattagcatgtaattattttcca
ctgataaaattacagaagggtgatattatggttaacagatatcacatcgacatacaacat
ccgcgtttaaagttgaattggttcgattttaatttgttgtcaatgaagcgttcagatatt
tctcgtgatccatttaaattagcatacgatgggaagagtactttgttcacagttgacaaa
ttacatttgaagcaagtcggtgaagaagcagatacggaaaaattttccttcaaaaccgct
cgagaaaataagccatcagagttgtcaattttgattaaattcactggtctggttcatttg
gactttcgaaatgcagaagccggttcactggatgaacgtaaaaagggtccaattcaattt
ttggatatattgtttgcacaagggcgttcatctccaatattcgatttgtcgaaatcattc
aaagcagtcaggaattcattttattgcattccacaaggtgctggtgcggacatgaaatat
ggcattgaattgtggagaggcttgttcatttcagcgcgcgtaattgatggttttcgacca
gcgattaatattgatggtgtgatggaaattgtatcacacagttgcttttacaagcgtcag
tcactgataaatttgatttgcgacatattgaatggtgatgaacgtgaagtaaaatttcat
ccaaatcagcttagactggatacccgacttcaaccagaacagttgagcttgttgatacca
gaattaaaaggggttagcattcatacaacacatcgaaatcaagatcgaatttatcgtatt
aaagatatactcagtacggcagtatcgatgaaattcaaaagagatggaaaagaagtttca
gttgcggaatattttcgtgacgtttatgggccattaaagtatccaaatttgcccttgctt
tgtcaagtcgcgaactgtcaaagatacaacaagaaattgaaagcgtgtcaaacgacttct
ataattcgatttgcttcgacagacgctcctactcgaaatctaaagtgtattgacatggtc
aagaaatcaaatttcaatagtgatccatttttgaaaagttttggcgtacaaattaaagcg
gaaccaatgattgttgatggacgagtcttgcctccgcctaggttggaatatggtaaagga
aatggaggacgtcaaataattcttacaccaaaagatggagcatggaattcgaatgaattt
aaattttttgaatctgcttattgtgaatcatttggatttgtatcgtttctaccaccacat
aaagcatcaatgttacaggaattttgtctgcaaattgtcagaacatgtcgtagtacagga
attgaaatgccggacagcccaaaattttatgaacaagcgcggaaaaatgataccgtagaa
atggtattcaaacgtattgctgacaaatgtgacagagatggaataaaatgtgatttggta
tttgttgcgttattttcatctgaacaatatgctcaagtgaaatcttgtggtgatatcact
tttggattggtcactcagtgtgtattaccgaaaacaataagtgatgtcgcagtaaagaat
agttattcgacgatgttaaatattgcgatgaaaataaatatgaaaattggtggcatcaat
acaaaattactggaagatgaaaataatgcattggtaattggtgtggatgtggttcatcca
tcagctgtagaaacgcatttaccatcaatagcttcggttgttggaaatgttgatgcaaat
gtaacgaaatttcatgcctcggtgaaaatacaaccagctaagcaagaactgatcacagga
tttatcgaacaattttctgatcgtttactggaatacgttgatgttaatggtactgccctg
aaaaatattattgtttatcgagatggagtgtcagaaggtcaatttatgcaggttttggaa
gaagaactgcctgctcttcgtagggcttgcaaatcatttgcaacaaattaccggccgttg
attacgtttattgtggttcaaaagcgacatcatgctcgatttttttgttgtgatgaagct
gcagcacgaggacgcgggaaaaacatccctgctggtactgttatcgatagagtagtgaca
tctcctaatgaatatgatttctttttgtgcagtcatcatggaattcaaggaactagtaga
ccgacgcgatatcatgtgctgcttgatgaaagcaacatggatgcgaatgcaatgcaatca
gttacatactatttatgccatctatatggtagatgtgctcgctctgtcagtataccagca
ccagtatattttgcagatttagtttgcgcccgtgctcgttatcatgttcttgcagcatta
aattctggtctagtggaaaagttttctgatgaggacagtaacagcagtagtagtagtagt
agtagtagtagtagtagta
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integrated database retrieval system
