Thamnophis sirtalis (common garter snake): 106537623
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Entry
106537623 CDS
T06107
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106537623 (PRDM13)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106537623 (PRDM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-BED
Motif
Other DBs
NCBI-GeneID:
106537623
NCBI-ProteinID:
XP_013907281
UniProt:
A0A6I9WYQ9
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MLSSRPPPALGITAESSIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDEA
GASAVEWIGLIRAARHAQEQTLEAVADLPGGQIFYRALRDVQPGEELTVWYSNALAEWFD
IPASATPTHDEKGEERYICWYCWRTYKYPNSLKAHVHFHCVLNHGRGFAGAPDHHRTGDL
FGTALKPAAAPSPRPPCPATFRDAVKRESTGSPSLAKAGGSGRKGAKAEQERALDMSVGS
GRGPGQFWGLLGSTSGGSNGLSFYPGVRSAFKPTGLAKEDSAAFREEGKGGGFSKALGSL
KPGRVCGQAGGSRHPPPPPHTKCHPPPGPPPPPSPAGLAYSGAVRGFPFLASFEENSAFK
HVERGFSANLSPPSGRYPRLAGGAGLHLERFAALPPFEGLAPYSPSGDCPLPSLLPSFAV
YNGELLYSAPCYPLNLHFGNFLKYPETAPYFGGAAAAGLHPAELGSLAGVDREMALHTHQ
FSEIAAAEKSRGRLESLPAAAAAGSAGGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYK
PLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLP
KGGAEELQEPKTDNESDVDVCFTDDQSDQDTGSSGGGGGCRAKEQQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctaagcagccggcccccgccagccctcggcatcaccgcggagagcagcatcccggct
ggcctgcggctgggtcctgtgcccggcaccttcaaactgggcaagtacctgtccgatcgc
agggagccgggacccaagaaaaaggtgaggatggtgagaggggagctggtggacgaagcc
ggagcctcggccgtagaatggatcggactaatccgggctgccagacacgcgcaagagcag
actctggaagcggtggcagatttgccggggggacagattttctaccgggcattgcgagac
gtccagccgggagaggagctgaccgtgtggtattccaacgctttggctgagtggtttgat
atcccggcctcggcgactccgacccacgacgagaaaggagaggagcgctacatttgctgg
tactgctggcggacctacaagtaccccaacagcctcaaggcccacgtccacttccactgc
gtgctgaaccacggccgcggattcgcaggagcaccggaccaccaccggaccggagacctc
ttcggtacggctctgaaaccggctgctgcgccgtctccgaggcccccttgcccggccact
ttccgagacgccgtcaagcgggaatcgaccggctcgccgtccttagccaaagcgggcggg
agcgggcgcaaaggtgcaaaggccgagcaggagcgagccttggatatgagcgtgggctcg
ggacggggcccgggacagttttggggtctgctgggcagcacctccggaggcagcaacggc
ttgtctttctatcccggagtgaggtcggccttcaagcccaccggcctggcgaaagaagac
tcggccgcttttcgggaagagggtaaaggcggcggcttcagcaaggccttggggagcctc
aagcccggccgggtctgtggtcaagccggcggctcccgccacccgcctccgcctccacac
accaaatgccacccgccgcccggcccgcctcctcctccttccccagcggggctggcttat
tccggcgccgtccggggcttccccttcctagcgtccttcgaggaaaactccgccttcaag
cacgtggagcgcggcttctcggccaacctttctcccccctccggccgctacccgcgcttg
gcgggcggcgccgggctccacttggagcgcttcgccgccttgccgcccttcgaaggcctg
gcgccctactcgccctccggggactgcccgctcccgtctctcctgccttccttcgccgtc
tacaacggcgagctgctctacagcgccccctgctacccgctcaacctccacttcggcaac
ttcctcaagtacccggagacggcgccctatttcggcggggccgccgcggcgggcctccat
ccggccgagctgggctcgttagccggcgtcgaccgcgagatggctctgcacacgcaccag
ttctcggagatcgcggcggccgagaagagccgcggccgcctggagagcttgccggccgct
gcggccgcgggctccgccggcggcaaacccaagacgggccacctgtgcctgtactgcggc
aagctctactcgcgcaagtacggcctgaagatccacatgcggactcacaccggctacaag
ccgctcaagtgcaaggtctgcctgcggccttttggcgaccccagcaacctcaacaagcac
atccgcctgcacgccgaaggcaacaccccttatcgctgtgagttctgcggcaaggtccta
gtcaggcgccgagacctggaaaggcacgtcaagtctcgccacccgggtcagagcttgccc
aagggcggcgccgaggagctccaggagccaaagacggacaacgagagcgacgtcgacgtc
tgcttcacggacgatcagagcgatcaggacaccggcagcagcggcgggggcgggggctgc
cgggccaaagagcagcaataa
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