Thamnophis sirtalis (common garter snake): 106538753
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Entry
106538753 CDS
T06107
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
106538753
NCBI-ProteinID:
XP_013908837
UniProt:
A0A6I9X4Q4
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Position
Unknown
AA seq
639 aa
AA seq
DB search
MLSILHFSSFPRSRLWSTLSNALLDEKGKHPFNLRSQGSQARGEQGPQGPAGPPGPRGFP
GPPGEPGKPSYGSQGPPGPQGPPGLSAAGKPGTAGLPGRPGDKGFPGEKGSMGPPGLPGP
KGSPGAPGPAGISVAGKQGLPGPQGLRGIPGEKGVPGIPGIKGQRGENGHGVPGRPGEKG
LPGPQGPPGQAGIGRPGERGFPGQPGVKGDKGSPGLPGPVGLPGPQGSPGKPGMPGKGLP
GSSGSPGLPGTPGAKGPPGPPGSTGPSGLPGFGKPGLPGMKGNRGPEGLPGSPGAKGEQG
PAGIPGRSGPVGPPGETGPRGLRGATGASGRAGLKGERGPTGPSGFPGIKGERGLPGLEG
RSGKPGFPGSKGYPGVAGSKGDLGPTGPTGLPGPMGSPGPKGAAGINGGPGSRGSPGIPG
IRGPVGPPGIPGLPGGKGDPGAPGLPGPAGISSKGTDGPMGPPGPPGSKGHPGEPGLPGP
PGPPGPSGQALAGVPVIKAGATQGLTGRPVSAFTAILSKAYPASAAPIQFDIILYNKQQH
YDPRSGIFTCRIPGLYYFAYHVHVKGTHVWVGLYKNGSPIMYTFDEYKKGYLDQASGSAV
VDLMENDQVWLQLPNNDTNGLYSSEYVHSSFSGFLFAQM
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctatcctacatttttctagctttccaagaagtaggctgtggtctactttgtcc
aatgccttgttggatgaaaaaggaaagcatccatttaatctaaggagccaaggttcacag
gcaaggggagaacaaggcccgcaaggcccagcaggcccccctggccccagaggcttccca
ggacctccaggagaaccaggaaaaccaagctatggaagccaagggcctccaggacctcaa
ggacccccaggactttcagcggcaggaaagccaggaaccgcaggcttgccaggaagaccg
ggagacaaaggattccctggtgaaaaaggaagcatggggcctcctggtcttccagggcca
aaaggttcccctggagctcctggtcctgcgggaatttctgtggcagggaagcaaggactc
ccgggaccccaaggactaagaggcatccctggggaaaaaggtgttccaggcattcctggt
attaaagggcaaaggggagaaaacgggcacggggttccaggtcggccaggggagaaaggc
ctgccagggccacaggggcctccaggacaagcagggataggaaggcctggggaaaggggg
tttccagggcaaccaggtgttaaaggggacaagggttcaccaggcttaccaggccctgtt
ggacttccaggtccccaaggctctcccgggaaacctggaatgcctggaaaaggactcccc
ggctcaagtgggtcacctggcctcccaggaactcctggggcaaaaggacccccaggtcct
cctggctcaactggaccctctggtctcccagggtttggaaaaccaggattgccagggatg
aagggaaacagggggcctgaaggactccctggaagtccaggcgctaagggagaacaaggc
ccagctggtatccctggaagatctggaccagtcgggccacctggggaaacaggtcctcga
gggctaagaggcgccactggcgcaagtggcagagctgggctcaaaggggaaagaggccca
actggtccatcaggattcccggggattaagggagaaagaggcttgccaggattggaaggc
aggtcagggaagccagggtttcctggatccaaaggctatccaggtgtggcaggatctaaa
ggagatctaggccccactgggccaactggtttacctggaccaatgggctcaccaggaccc
aaaggtgcagcaggaatcaacggtgggccaggctctagaggatcacctggtatacctggt
ataaggggacctgttggtcctccaggtattccaggactccctggaggcaaaggggaccca
ggtgcaccaggattaccaggtccagctgggatttcatcgaaaggcacagatggacctatg
ggaccacctggaccaccaggttccaaaggccaccctggggagcctggattgccaggccct
ccaggcccccctggtccttcagggcaagccctggcaggagtgccagttataaaagctggt
gcaactcaaggtctcactggcaggccggtgtccgctttcactgccattctctccaaagct
taccctgcatctgctgctcctatccaatttgacataattttgtacaacaagcaacaacac
tatgaccccagatcaggcatcttcacctgcaggattccagggctttactacttcgcttat
catgtccatgtcaaaggcacacatgtttgggttggcctgtacaagaacggctcacccatc
atgtacacatttgacgagtacaagaaaggataccttgatcaggcttccggaagtgctgtt
gttgatctcatggaaaatgatcaagtctggttacagctgcccaacaatgacacaaatggc
ctttactcttcagagtatgtccactcctccttctcaggtttcttatttgcacaaatgtaa
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