Thamnophis sirtalis (common garter snake): 106539668
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Entry
106539668 CDS
T06107
Symbol
COL28A1
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106539668 (COL28A1)
Peptidases and inhibitors [BR:
tsr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
106539668 (COL28A1)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
106539668
NCBI-ProteinID:
XP_013909984
UniProt:
A0A6I9X3V8
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MWKKHSVLYLLVLAIAINNVVYGQNRRKGQRLSPLARKDNLQDSVCFIDIIFVLDSSESA
KGILFDKQKEFAILLSDKVFLMKPTRALRYDIRLAIMQFSSTVRIDYPFSVWRNLQIFKQ
KVNEMSYIGHGTYSYYAISNATQLLKAEGRKTGIKVVLLMTDGIDHPKSPDIQVISEKAR
ALGISFITIGLSNDVNQTKLHLISGDSPGKSVFILNEPNLSDKIRNQLATLFEERCGKSC
ECQKGDQGPPGPPGGHGGRGDKGEQGPKGQKGEAEKGEPGEKGSEGNPGYKGEKGDRGEC
GTPGLKGDRGLDGPSGPKGPRGPQGIGGPPGDSGSKGIQGNKGEPGPAGPYGPAGIPGIG
YPGPKGDRGQEGRIGLPGPTGIGEPGLTGPRGPEGMQGERGPPGEGLPGRKGDKGSEGPA
GPVGSPGLSIKGDKGERGIEGVQGPVGPPGTGIQGNQGIQGLKGAPGVKGSRGIGLPGQK
GEMGPSGQKGDIGAPGIGQPGPKGDPGRSGFTGESGKPGIQGIPGKKGEQGLPGPRGPDG
IPGTGHLGPKGEEGQKGAQGLDGPRGIPGPAGPKGESGIKGDIGSPGPSIRGLPGPKGEQ
GYPGPPGNDGSPGHTIIGPKGAPGVIGPPGPQGAKGDGFPGPPGSQGLPGFPGPRGLKGA
GDPGQKGEQGARGPPGPPGQRGVGIPGPKGIMGQKGFPGPPGAPGDSIQGNKGEQGIQGS
SGPKGSIGIGLPGPKGDYGEKGEQGKRGNKGEIGEPGPQGPRGFSGQKGEPGLTKEEIIK
LIMEICGCGVKCKENPLELVFVIDSSESVGPENFERIKRFVKTMIDAITVNQATTRIGII
NFSLKVEVVSTLQQFPTKDSLKNAVDTMQYYGEGTYTATAISKAIDVFQMARQGVRKVAV
VITDGQADQRDPHKLEVVVRDAHALKIEIFVIGVVQKTDPNFENFRKEMDLIATDPDSDH
VYQIDDFMTLQALEDKIFKQICENDLSSYITEVLSSALSPRFETSEHGTQLAKIDIPGSY
APPLHPETSDSFSKKPSEKEALYLDRYHNVTPTTYKYIPEHHRRPVTPHPDLAVVPTPAV
VLLPTVIHVMKETRCLEPMKTGSCRNYQVKWFYAKDTNSCARFWYGGCEGNQNRFETEQE
CQAICVQG
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaaacactccgtcctttaccttttggttttggccattgcaataaacaatgta
gtatatggacaaaacagaaggaagggacaaaggttaagtcctctagcaagaaaagacaat
cttcaggattctgtctgttttattgacatcatctttgttctggatagttctgaaagtgca
aagggtattttatttgataagcagaaagagtttgctatcctcttaagtgataaagtcttc
ctcatgaagcccacccgtgctctcagatatgacatcagactggccatcatgcagttcagt
agtactgtcagaattgactatcctttttcagtgtggagaaacttgcagatttttaagcaa
aaagtcaatgaaatgagctacattgggcatggcacctattcctactatgctatttctaat
gcaactcagctgctcaaagcagaaggccgtaaaacgggcatcaaagtggttttgcttatg
actgatggtattgaccatcccaaaagtcctgacattcaagttatatcagaaaaggccaga
gctcttggaatatctttcattaccattggtttatctaatgatgtcaatcaaaccaagctg
catttgatatctggtgattctccagggaagtctgtattcattttgaatgagcccaacctt
tcagataaaataaggaaccagttggccactttatttgaagagaggtgtggaaagagctgt
gaatgtcaaaaaggcgaccaagggcccccaggaccacctggtggccatggaggaagaggg
gataaaggtgaacaaggacccaagggacaaaagggcgaggctgagaaaggagaacctggt
gaaaaaggttcagagggaaaccctggatataagggagaaaagggtgacagaggagaatgt
ggaacaccagggttaaaaggagacagagggctagatggcccttctggccccaaaggaccc
agaggccctcagggtattggtggcccaccaggtgattctggctcaaaaggcattcaagga
aacaagggagagccaggaccagcaggtccttatggtcctgcaggaatccccggaattgga
tatccaggacctaagggtgatagaggtcaagaaggaagaattgggcttccaggaccaact
ggaattggtgagccaggcttaactgggccacgtggtcctgagggcatgcagggtgaaaga
ggtccacctggtgaaggactcccaggacggaagggagataaaggttctgagggacctgct
ggaccggttggatccccaggtttatccatcaaaggagataagggtgaacgagggatagaa
ggagtacagggtccagtgggaccacctggaactggcatccaaggaaatcagggtattcaa
gggctgaaaggtgctcctggtgtgaaagggtcacgaggaataggactgcccggacaaaag
ggagaaatggggccatctggacaaaaaggagatataggagcgccaggaattgggcagcct
ggaccgaaaggagacccaggaaggtcaggatttacaggagaaagtgggaaaccaggaata
caagggataccaggaaaaaagggagaacaagggctgcctggcccaagaggcccagatgga
attccagggacaggacacttgggtccaaagggtgaagaaggtcagaaaggtgcccaagga
ttagatggaccacgaggtattccaggccctgcaggaccaaagggagaatctggaatcaaa
ggtgacattggttctccaggaccttcaatacgtggactacctggccccaagggtgaacaa
ggatatccaggccctcctggaaatgatggaagtcctggacatacaattattggacctaag
ggtgctccaggtgttattggacctccgggaccacaaggggctaagggggatggttttcct
ggtccaccaggatctcaaggattgcctggctttccaggaccaagaggccttaaaggagct
ggtgacccgggacaaaagggagaacaaggagcacgaggaccaccagggcctcctgggcaa
agaggagtgggaatacctgggccaaagggtattatgggacaaaagggttttcctggccct
ccaggtgctccaggagacagcatacaaggaaataagggagagcaaggaattcaaggttca
tcaggaccaaagggctccataggaattggactacctggtccaaagggtgactatggagag
aagggagagcagggaaagagaggcaataaaggagaaattggagagcctggccctcaagga
ccaaggggattttcaggacaaaagggtgaacctggtcttactaaagaagaaataatcaaa
ctcattatggagatatgtggctgtggtgttaagtgcaaagaaaatcctttagagcttgta
tttgtgattgacagttccgaaagtgttggacctgaaaactttgaaagaattaagcggttt
gtaaaaactatgattgatgctatcacagtcaaccaagccacaactcgcattggcatcatc
aattttagcctcaaagtggaggtggtgtccacactgcagcaatttcctaccaaagacagt
ctgaaaaacgctgttgatacaatgcaatattatggggaaggcacatacactgctactgct
atcagcaaagccattgatgtatttcagatggctcgacaaggagttagaaaagtggcagtg
gtaataacagatggacaggcagatcaacgtgacccacataaactggaagtagtggtgaga
gatgcccatgccctcaaaatagaaatatttgtaattggggtggtacagaagactgatccc
aactttgaaaattttcgaaaagaaatggacctaattgctactgatccagacagtgatcat
gtctaccagatcgatgacttcatgactttgcaagctcttgaggataagattttcaaacaa
atttgtgaaaatgatttgagttcctatatcaccgaagtgctcagttcagctctttctcca
agatttgaaaccagcgaacatggcactcagttagccaaaattgatattcctggatcatat
gcccctccccttcacccagagactagtgattctttttcaaagaaacccagtgagaaagaa
gcattatatttggatcggtatcataatgttaccccaaccacttataagtatattcctgaa
catcatagacgcccagtcactcctcatccggatttagcagttgtgcctacaccagctgtt
gttctgcttcctacagtaatacatgttatgaaagaaacaaggtgtttagaaccaatgaaa
actggaagctgccgaaactatcaagtaaaatggttttatgccaaagatacaaattcttgt
gcccggttttggtatggaggttgtgaaggcaaccagaatagatttgaaactgaacaagag
tgccaagcaatttgtgttcaaggataa
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