Thamnophis sirtalis (common garter snake): 106540179
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Entry
106540179 CDS
T06107
Symbol
TRIM66
Name
(RefSeq) tripartite motif-containing protein 66
KO
K12032
tripartite motif-containing protein 66
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106540179 (TRIM66)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106540179 (TRIM66)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
Motif
Other DBs
NCBI-GeneID:
106540179
NCBI-ProteinID:
XP_013910695
UniProt:
A0A6I9Y1M9
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MARNCSGCKEKRPAHSLCTNCNKWLCSLCTEEHSHSKEAGGEHYLPVSLKGCSGVEGEAN
ENPLFCPMHSQERLKLFCETCDVLTCRCCLLTEHKDHRFRHLQEALQNQRVILENITCKV
EEKKNVMQVSAKHIEDRLFEAKHLQRKIENQIKMAKMVLISEINKRTNVLLEQLERITSE
RKQKMEQQLQGIMMLNRQFEHVQNFLSWAVCSKSTVPFLFSKELIVFQIQRLLETNCNAD
VGCPWKIRFTWDPSFWTKQLSNIGHLSMEGGPSHHSDVPTYASIQGMQPSLYHHHGHHSP
VPQHDPLNNQPHQYQPPVHCLAPMCFAHCLNIPHMNKGQLSHQTVSHPQPFRQPSEIQQH
HPQHFPVQYSLQQHEREQRCAPRVLKSMQPCAEQKSHQEPDGLTTRLGKNSQEQPMHLPP
IYPLSSQDDHQSQGSHSQQLPVQSSLHSPTVQVQVGPLQKLKLNNLQQQPQPQPPPPQPQ
PQPQPPQQEHALPPPPPLSPQQSPAAGPNEKSHEHVIQQSLDIMHHQFELEEMKKDLELL
LQAQQPSLQLNQAKQPQHVQQTIVGQINYIVRQPATVQQQNQEEVQQIGEDSAESEGQKP
ALPLDRNVIPSMSQPGDEATVNRQSPESILSPVRKRSASMNIVGFPNILEVDLSSSRAPR
QADSQAKEICSATPSLPQNVSHVSEVLPESVSTYNLSLDRTRTLSSENIEHLAIGGMPLV
NPVCKLENEEFSHVSYPLGSNIVTAQSKAMNEMALPLQNILEEPINLSVKKTQPCTSPPL
LISNTTFMQSVNPKPGHTEDSPNCEEEHFEKEIKTSENNRICAKEVKIPYVRLERLKICT
SESGELPIFKLQPQKSTHDGTFLLIIECGTQSSSMAIKVNQGHSSESLNPKLEENLEKSR
ILTSQLTEQVLLPSGDHRLSNNMKKSGLPHEDHTIENEDFCAVCLNGGELLCCDYCPKVF
HLSCHVPALLSFPVGEWVCTLCRNVETPEVVYDCENTRFDYNTLMQARPVYGLGEYDQKK
CEKLVLSLFCNSLSLPFHEPVSPLARHYYQIIKKPMDLSTIRKKLQKEDQLHYTSSEELV
ADVRLMFWNCGTFNYPDSEVAEAGRCLEIFFESKLKEIYPMRQFPLVQQDDSDLEDVEHE
NSQATPEGLQWPSYRQECIQPKRRRRHAENEKPKRPMFWPAKGFSQV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaattgctctggttgcaaagaaaaaagacctgcacacagtttgtgtacaaat
tgcaacaagtggctttgtagcttatgtacggaagaacacagccacagcaaagaagcagga
ggggaacattatttgccagtctccttgaaaggatgttcaggagttgaaggggaagccaat
gaaaatcccttgttttgtccgatgcatagccaagagaggcttaagctgttttgtgagact
tgtgacgtccttacctgtcgctgctgcctcctgacagagcacaaggatcacagattcagg
catcttcaagaggcattgcaaaatcagagggttatcctggaaaatattacctgcaaagta
gaagagaaaaaaaatgtaatgcaagtctcagctaaacatattgaagacagattgtttgaa
gcaaaacacttgcaacggaaaatagaaaatcagatcaaaatggccaaaatggtcctgatc
agtgaaataaataagcggacaaatgttctccttgaacagttggagcggatcaccagtgaa
aggaagcaaaaaatggaacaacagcttcagggaattatgatgttaaacaggcagtttgaa
cacgtgcaaaactttcttagctgggcagtatgcagtaaaagcaccgttccattcctcttc
agtaaagaactgattgtttttcagattcagcgtttgctggaaaccaactgtaatgcagat
gtgggttgtccttggaagatcagattcacgtgggacccgtctttttggactaaacaacta
tccaatataggccacttgtcaatggaagggggcccaagccaccattcagatgtaccaaca
tatgcaagtatacaaggaatgcagccatctctgtatcaccatcatggccatcattctcca
gtgccacaacatgacccactcaataaccagccccaccaatatcagcctcctgtccattgc
ctggcacctatgtgctttgcccattgccttaatatcccacatatgaacaaagggcagctt
tctcatcaaactgtgagccaccctcagcctttccgccagccttctgaaatacagcaacac
cacccacaacatttccctgtgcagtacagcttgcagcaacatgagagggagcagaggtgt
gccccacgggtgctgaaaagcatgcagccgtgtgctgagcagaaatctcatcaagagcct
gatggcctaactaccaggttgggcaagaactcccaagagcagccaatgcaccttccacct
atttatcccctttcgtcacaggatgaccaccaaagccaaggtagtcattcccagcaactc
cctgtacagtcttctcttcacagtccaacagtgcaggttcaagtcggtcccctccagaag
ctaaagctgaataatttgcagcaacagccacagccacagcctccaccaccacagcctcag
ccacagccacagccaccacaacaggaacatgcattgccacccccaccacccctctcacct
caacagtcacctgccgcaggcccaaatgagaaatctcatgaacacgtgatacaacagagc
ttggacatcatgcaccaccaatttgaactggaggaaatgaagaaagatttggagcttctc
cttcaggctcagcaacccagcctacaactcaatcaggccaagcagcctcagcatgtgcag
caaaccattgttggccagataaactacattgtcaggcagccagccacggttcagcagcaa
aaccaagaagaagtgcagcaaattggtgaagattctgctgaatcagaaggtcaaaaacca
gcacttcctcttgatagaaatgtgattccatctatgtctcagccaggagatgaagctact
gtcaacaggcaatctccagagagtatattgagtccagtcagaaagcggtcagcttcaatg
aacatagtgggttttccaaacattttagaggttgatttatcttcatcaagggcacccaga
caagctgattcacaggcaaaagaaatctgcagtgcaacacctagcctgccccagaatgta
tcacacgtctctgaagtgcttcctgaatctgtatctacttataatctgtccttggataga
acgaggaccctgagttctgaaaatattgaacatttagcaattggtggcatgcctttggta
aacccagtttgcaagctggaaaatgaagagtttagccatgtgagttatcctcttgggagc
aatattgtcactgcgcaatcaaaagccatgaatgaaatggctcttcctttacaaaatatt
ctggaagagcctattaatctctcagtgaagaaaactcagccatgtacttcccctccctta
cttatcagcaatacaaccttcatgcaatctgttaatcccaaaccaggacacactgaagat
agtcctaactgtgaagaagaacattttgaaaaggaaattaaaactagtgagaacaacaga
atttgtgccaaagaagtgaaaattccatatgtgcgattggaacgattgaagatatgcaca
tcagaatctggagagcttccaatttttaaattgcagccacagaaaagtacacatgatggg
acatttctgttgattattgaatgtggtactcagtcttcaagcatggctattaaggtcaat
caaggacattcatctgaaagtctaaatcctaagcttgaagaaaacctggagaaaagcagg
atcctcacaagccagctgactgaacaggtgttacttccttcaggagatcacaggctaagt
aataatatgaagaaatctgggcttcctcatgaagatcacactattgagaatgaagatttt
tgtgctgtttgcctaaatggaggagaacttttgtgttgtgattactgcccaaaggtgttt
catctttcatgccatgttcctgcattacttagttttcctgtaggtgaatgggtgtgcaca
ctttgtcgcaatgtggaaacaccagaggtagtctatgattgtgaaaacacacgatttgac
tataatacactcatgcaagcaagaccagtttatggccttggtgaatatgaccaaaagaag
tgtgaaaaattggtgctttcactgttctgcaatagcttgagtcttccattccatgaacca
gtcagtcccctggctcgccattattatcagattataaagaagcccatggacttgtccact
attcggaaaaaacttcagaaagaagaccaactacattatacctcttcagaagagctggtg
gctgatgtgcgtcttatgttttggaactgtggaacattcaactatcctgattcagaggtt
gctgaggctggaagatgcttggaaatattctttgaaagcaagctcaaggaaatttatcca
atgaggcaattccccttggtacaacaagatgattctgatttagaagatgtggaacacgag
aatagtcaagcaaccccggaaggattgcagtggccttcatataggcaagagtgtatccag
cctaaaagaagacgaagacatgctgaaaatgaaaaacctaaaagacccatgttttggcct
gcgaaaggtttctcacaagtgtga
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