KEGG   Thamnophis sirtalis (common garter snake): 106540337
Entry
106540337         CDS       T06107                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106540337 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsr03041]
    106540337 (SF3B4)
Spliceosome [BR:tsr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106540337 (SF3B4)
 Complex B
    106540337 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    106540337 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 106540337
NCBI-ProteinID: XP_013910889
UniProt: A0A6I9X616
LinkDB
Position
Unknown
AA seq 417 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTTLGPGVTPPGIPPP
GSFPPPVPPPGALPPGLPPSMPPPPMPPGAGAPGPPSAGAPGGAHPPHPHPFPPGGMHPG
MPQMQVHHGMPGMGPHHPGPPGAGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHPG
PMPPHGMRGPPPLMPPHGYNGPPRPPPYSYQRIPLPPRPAQRPMVPPRGPMRGPLPP
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggcggcgggccccatctcggagcggaaccaagatgccaccgtctacgtgggcggcctg
gacgagaaggtcagcgagccgctcctgtgggagctgttcctccaggcggggcccgtggtc
aacacccacatgcccaaggaccgcgtcacgggccagcaccaaggctatggcttcgtggaa
tttctcagcgaggaggacgctgactacgccatcaagatcatgaacatgatcaaactctac
gggaagcccatccgggtcaacaaggcctcggcccacaacaagaacctggatgtgggcgcc
aacatcttcatcggcaacctggacccggagatagacgagaagctgctgtacgacacgttt
agcgccttcggggtcatccttcagactcccaagatcatgcgtgaccctgacacgggcaac
tccaagggttacgccttcatcaactttgccagctttgatgcttcagatgctgccatagag
gcgatgaatggacaatacctctgcaaccgccccataaccgtttcctatgccttcaagaag
gattctaagggggaaaggcatggctcagcggctgagcgcctcctcgctgcgcagaacccc
ctctcccaggcagaccggccacatcaactctttgcagacgctccacccccaccctcggtg
cctacgccagtggttaccaccttggggccaggggttactcctccaggcatccccccgcca
ggatcatttcctccaccagtaccccctccgggagctttgccaccaggattgcctccatcc
atgccacctccacccatgccaccaggagctggtgccccaggacctccttctgcaggagcc
cccggtggggcgcatcctccccacccacatcctttccctcctggcgggatgcatccaggg
atgccgcaaatgcaggtccatcatggaatgcccgggatgggcccacatcaccctggacct
ccaggagcaggggggcagccacctccgcgcccacctccaggcatgccccatcctgggcca
ccccccatgggcatgccacccaggggacctcactttggatccccaatgggtcatcctggt
cccatgccacctcatggcatgcgtgggccgcctcctttgatgccaccccatggatacaat
ggcccacctcggcctcctccctacagctatcagcgcatccctctgccgcctcgtcctgcc
caacggcccatggtgcctccgcggggacctatgcgggggcctctccccccctag

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