Thamnophis sirtalis (common garter snake): 106541079
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Entry
106541079 CDS
T06107
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106541079 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106541079 (SNRPA)
Spliceosome [BR:
tsr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
106541079 (SNRPA)
Complex B
106541079 (SNRPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
106541079
NCBI-ProteinID:
XP_013911881
UniProt:
A0A6I9XC93
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MAVPESRSNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFK
EICSSTNALRSMQGFPFYDKPMRIQYAKADSDIIAKMKGTFVERDRKREKRKPKGQEVQA
VKKQMPGAAAPVAPSVQGTVPGMPPMNQGPCVMHHMPGQPPYMPPPGMMPPPGMAPGSMP
PGAMPPQQMLPGQMATAQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPG
RHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcccagagtcccggtccaaccacaccatctacatcaacaacctcaacgagaaa
atcaagaaagacgagctcaagaagtccctgtacgccattttttcccagtttgggcagatc
cttgacattctggtgtcccgtaacctgaaaatgagaggccaggccttcgtcattttcaaa
gagatttgcagctccaccaatgccttacgctccatgcaagggttccctttttacgacaag
cccatgaggatccagtatgccaaggcagattccgacatcatagccaagatgaagggcacc
tttgtggagagggaccgcaagagagagaagcgaaagcccaaaggccaggaggtgcaagca
gttaagaagcagatgccaggagcagctgccccggttgccccctctgtccagggcaccgtg
ccgggcatgccccccatgaaccagggcccgtgtgtgatgcaccacatgccagggcagcct
ccttacatgccacctccaggcatgatgccgccacctggcatggcaccgggctccatgccc
ccaggggcgatgccaccacaacagatgctgccaggacagatggccacagcgcagctctca
gagaatccgcctaaccacatcctgttcctcaccaacctccctgaggagacgaacgagttg
atgctgtccatgctcttcaaccagttccccggcttcaaggaggtgcgattggtgcccggg
cgccatgacattgccttcgttgaattcgataacgaagtgcaggctggtgccgcccgtgat
gccctccaggggttcaagatcacccagaacaacgctatgaagatctcctttgccaagaag
tga
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