Thamnophis sirtalis (common garter snake): 106544090
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Entry
106544090 CDS
T06107
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106544090 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106544090 (SS18)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106544090 (SS18)
GBAF(ncBAF) complex
106544090 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
106544090
NCBI-ProteinID:
XP_013915718
UniProt:
A0A6I9XYR2
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTLECSQYQQLLHTNLVY
LATIADSNQNMQSILPPPPTQNMPMGPGGMNQSGPPPPPRTHNMSSDGMVGGGPSAPHMQ
NQMNGQMPGPNHMPIQGPGPSQLSMTNNSMSIPSNNHGSMGAYNHSVPSSQSIPGQSQMT
ISQGQPMTSYGPRPNININQGPMMHQQPPSQQYNIPQGGAQHYQGQQPPMGMISQVNQGN
HMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHSDYGYQQ
PSYPEQGYDRPYEDSSQHYYEGGNAQYGQQQDAYQAPPQQPGYQQQQYPGQQGYPGQQQG
YGPSQSAPGPQYSNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcggcccctcggcagcggggcaaaggcgagataacgccggctgct
atccagaagatgttggatgaaaataatcacctgattcagtgtataatggactaccagaat
aaagggaaaactttggaatgctctcagtaccagcagttgttgcatacaaatctggtctac
ttagccacaatagctgactccaatcaaaacatgcaatctatactgccaccaccacccaca
cagaatatgccaatgggtcctggaggaatgaatcagagtggccctcccccacctccacgt
actcacaatatgagttcagatggtatggtaggtgggggcccttctgctccacacatgcag
aaccagatgaacggacagatgcctggacctaaccatatgcccatacagggacctggacca
agccaacttagcatgacaaacaactccatgagtataccttcaaataatcatgggtcaatg
ggggcctataatcattcagtgccatcttcacaaagtatacctggacagagtcagatgaca
ataagccaaggacaacctatgaccagctatggtcccagaccaaatataaatataaatcaa
ggtccaatgatgcaccagcaacctccatctcaacagtataatataccccagggaggggca
caacattatcagggacaacagccaccaatgggaatgataagccaagttaatcaaggaaac
catatgatgggacagaggcagattcctccatatagaccaccacagcaaggcccaccacag
cagtactcaggccaggaagactattatggggaccaatacagtcatggtggacagggtcct
ccagaaggcatgaaccagcaatattaccctgatggtcatagtgattacggttatcagcaa
ccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacattactac
gaaggaggtaatgctcagtatggccaacagcaagatgcataccaagccccacctcaacaa
ccaggctatcaacagcaacaatacccaggtcagcagggttatcctggacaacagcaaggt
tatggtccttcccaaagtgctccaggacctcagtattccaattatcctcaaggacaaggt
caacaatatggaggatatagacctacgcagcctggccctccccagcctccacaacaaagg
ccttatggatatgaccaggggcagtatggaaattaccagcagtga
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