Thamnophis sirtalis (common garter snake): 106544100
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Entry
106544100 CDS
T06107
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106544100 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106544100 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106544100 (SRSF5)
Spliceosome [BR:
tsr03041
]
Common components
Common spliceosomal components
SR proteins
106544100 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
106544100
NCBI-ProteinID:
XP_013915732
UniProt:
A0A6I9XP28
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MGGGTRWLVGTSGGAGRGDGPCEGAAFPDVRLRQPRAEELLENGTMSGCRVFIGRLNPAA
REKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARAR
SRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVT
FADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRSR
SSSRSRSRSRSRSRKSYTRSRSRSRSKSKSLSRSPAPEKSQKRASSSRSKSPASVDRQRS
RSRSRSVDSGN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggaactcggtggctggttggaacgagcggcggggcggggcggggcgatggg
ccctgcgagggtgctgccttccctgatgtcagactgcggcaaccgagggcggaggagcta
ctcgaaaacggtaccatgagtggttgtcgcgtattcattggaaggctaaatccagcggcc
agagagaaggacgtagagagattcttcaagggatatggacgcatccgagacattgatttg
aagagaggttttggatttgtggagtttgaagatcccagagatgctgatgatgcagtctat
gaactggatggaaaagaactctgcagtgaaagagttacaattgaacatgctagagcccgc
tcaagaggtggaagaggcagagggcgttattctgaccgttttagcagccgccgtccacga
aatgacagaagaaatgcaccacctgtaagaacagaaaatcgtctcattgtagaaaatttg
tcttctcgggtcagctggcaggatctcaaagacttcatgagacaagctggggaagtaaca
tttgcagatgcacacaggcccaaactaaatgaaggggtggttgagtttgcctcttatagt
gatctaaagaatgccattgaaaaactttctggcaaggaaatcaatggaaggaaaatcaaa
ctaattgagggcagcaaaaggcacagtaggtctagaagcaggtctcgctcccgtagcagg
agctcttcaagatcccgtagccgttctcgatcgagaagccgcaagtcttacaccagatcc
aggagcaggagccgtagcaaatcaaaatcacttagtcggtctcctgcccctgaaaagagt
cagaaacgtgcttcctccagtagatcaaagtctcctgcttctgttgatcgccagagatca
cgctcaaggtcaagatctgtagatagtggcaactga
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integrated database retrieval system
