Thamnophis sirtalis (common garter snake): 106544192
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Entry
106544192 CDS
T06107
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106544192 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106544192 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106544192 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
106544192
NCBI-ProteinID:
XP_013915870
UniProt:
A0A6I9Y7W2
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MENDKRGQGYTSAPASHGPAPYGPAPHGPAPYGPAPHGPAPHGPAPHGPAPHGPAPYGPA
PHGPAPHGPAPHGPAPHGPAPYACYSEAPAPAPKPRVVTTASIKPSVYQPAAPAPAPPSV
STHTYIPSQAEPSSRPPWVTDDSFSQKFAPGKSTTTVTKHILPKGAPVPPSSAAPPPIPA
SIQAPAIARGTIQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFYCAYCKASL
ADVGFVEEQNSVYCEHCYEQFFAPTCARCHIKIMGEVMHALRQTWHTTCFVCAACRKPFG
NSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNL
EGQPFYSKKDKPLCKKHAHAINV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgataaaagaggccaaggctacacttcagccccagcttcccatggcccagct
ccctatggcccagctccccatgggccagctccctatggcccagctccccatggcccagct
cctcatggaccggctccccatggaccggctccccatggaccagctccctatggcccagct
ccccatggaccagctcctcatggaccggctccccatggaccagctccccatggaccagct
ccttatgcatgctacagtgaagccccagcgcctgctccgaaaccaagagttgtgaccact
gcaagcataaagccctcggtctatcagccagcagctccagcacctgccccaccatcggtg
tccacacatacctatattccaagccaagctgagccttcaagtcgtcccccctgggtgaca
gatgactccttctcccaaaagtttgctcctgggaaaagtacaaccactgtcacaaagcac
attctgcccaagggtgctccggtgcctccatcttctgcagcacctcccccaattcctgca
tccatccaggctcctgctatcgcacgggggacaatccaaagagcagaacgcttccccgcc
agtagccgaactccactctgtggacattgtaacagcatcatcagagggcccttcttggta
gccatgggtcgctcttggcatcctgaggaattctactgtgcttattgcaaggcttctctg
gctgatgtgggctttgtggaagaacaaaacagtgtctactgtgagcattgctacgaacag
ttctttgccccgacctgtgccagatgccatatcaagatcatgggggaagtgatgcatgct
ttgaggcaaacttggcacaccacttgctttgtctgtgccgcctgtcggaagccgtttgga
aacagcctcttccacatggaggatggagaaccctactgtgagaaagactatgttgcctta
ttcagtaccaaatgtcacggatgcgacttccccgttgaggctggagacaaattcatcgag
gcccttggtcacacctggcatgatacatgcttcatttgtgctgtctgccatgtcaatttg
gaaggtcaaccgttttattcgaagaaagataagcctttgtgcaagaaacacgcccatgcc
atcaacgtctaa
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