Thamnophis sirtalis (common garter snake): 106545031
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Entry
106545031 CDS
T06107
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
106545031
NCBI-ProteinID:
XP_013916950
UniProt:
A0A6I9Y8H8
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All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MPPLLPMDLKGEPGPQGKPGPRGPPGPPGYPGKPGTGKPGLHGQPGPAGPPGFSGIGKPG
LPGLPGKAGMKGMPGPAGEIGPRGDQGQRGWPGPPGLPGPAGLSVNGKPGPNGSPGLPGF
RGEPGPKGEPGLRGERGAKGENGVGKPGLTGPRGNGGPPGPAGPPGPSGLGKPGLDGLPG
APGNKGDLGLPGEPGLSGQPGPMGPRGPPGVDGTGLPGIAGMPGLPGHLGPKGEPGLRGL
PGLPGATGYGKPGLPGLKGDRGQPGVPGIIGDKGEPGMDGEPGEMGPHGLVGVPGPQGVM
GLPGKHGLPGAKGEVGPSGPIGPPGLRGDQGPSGFAGKPGIPGERGLPGATGMPGPMGPK
GEGGFMGLPGAPGSSGLHGTKGDAGIPGQPGLRGPSGIPGLQGPSGPMGPQGLTGLKGEP
GPPGAPGISRVGEPGMIGPSGPPGVPGNPGITGLPGAPGPPGPPGVPGMSPDFEGHHLPD
GNVDGAVLGNGKSGKPQFGRGELSAQMLPAFTAILSSPFPASGMPVKFDRTLYNGQNGYN
PGTGIFTCPISGIYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLE
LKENDQVWIQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctccactgctgccgatggacctcaagggggaacctggaccacagggaaagccgggc
ccgagaggaccacctgggccgcctggctatccggggaaaccaggcactgggaaaccagga
cttcatgggcaacctggccctgctgggccccctggcttttccggcatcggcaaacctggt
cttccgggacttccgggcaaggctggcatgaaggggatgccagggccggcaggggagatc
ggcccacgaggagaccaaggacagcggggctggccagggccaccgggattgcctgggcct
gctggactctctgtgaatggaaaaccaggcccaaatgggagtccggggctccctggattt
cggggagaacctgggccaaaaggagaacccggcctgcgaggcgagcgtggagcaaagggc
gagaatggcgtgggaaagcccggactgacaggcccccgagggaatgggggaccgcctggc
cctgcggggcctccagggccttccggccttggaaaacctggcctggatgggttgcccggg
gctccggggaacaaaggggacttggggcttccgggtgagccagggctcagtgggcaacct
gggcctatgggccctcgtggccctccaggtgtggatggcactggactgcctggcatagct
ggcatgccgggtctgccaggccatttggggcccaagggcgaacctggcctgcgtggcctt
ccagggctgcctggcgctacagggtatgggaaaccagggctccctggcttaaagggggac
cgtgggcaaccgggagtgccaggaataatcggtgacaaaggggagcctgggatggatgga
gagccaggggagatggggccccatgggctggttggggtccctggccctcagggcgtcatg
ggtttgccgggcaagcatgggctcccaggcgcaaaaggtgaagtagggccaagtgggcct
ataggacccccaggtctgcggggagaccaggggcccagtggttttgccggcaagccgggg
attcctggggagagagggctccccggtgccacagggatgcctggcccaatgggtcccaag
ggggaaggtggcttcatgggacttcccggggccccaggctcttctggactccatgggacc
aagggagacgctgggatcccaggccagccaggcctcagaggcccttcaggaataccaggt
ttgcaaggcccctcgggtcccatgggcccccaaggtttgacaggcttgaaaggtgaacct
gggcccccgggggcccctggaatcagcagagttggagagccaggcatgataggcccctct
ggccctccaggcgttcctggcaaccctggaatcactgggctcccaggagccccagggcca
ccgggtccgcctggggtcccaggaatgtcacctgattttgagggccaccatttgcccgac
ggaaatgttgatggagcagtgttggggaacggcaagtcagggaaaccccagttcggccga
ggggaactctctgcccaaatgttgccagctttcaccgccattctgagctcgcccttccca
gcctcaggaatgcccgtcaaatttgacaggactttgtacaacgggcagaacggctataac
ccaggaacaggcatcttcacgtgccccatatccggcatctattacttcgcctatcacgtc
catgtgaaaggaaccaatgtctgggtggccctttacaaaaacaacgtgccggccacctac
acttacgacgagtacaaaaaagggtatttagaccaagcgtcgggcagcgccgtgcttgaa
ctcaaggaaaacgaccaagtctggatccagatgccctcagaccaagccaacggtctttac
tccaccgaatacatccattcttctttttccggattccttctctgccccacataa
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