Thamnophis sirtalis (common garter snake): 106545413
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Entry
106545413 CDS
T06107
Symbol
EGR1
Name
(RefSeq) early growth response protein 1
KO
K09203
early growth response protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04371
Apelin signaling pathway
tsr04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
106545413 (EGR1)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
106545413 (EGR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106545413 (EGR1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
106545413 (EGR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
DUF3432
zf-C2H2_4
zf-C2HC_2
zf-BED
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
106545413
NCBI-ProteinID:
XP_013917439
UniProt:
A0A6I9XNC5
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MAAAKAEMQLLPSLQMADPFGSFPHSPPTMDTNYPKLEEIMLLAGGGPQFLNPAGGPESG
GGGFNPSGEGGEQSFEHLAADTFPEISLNGEKSLAESSYPTQTTRLPPITYTGRFSLEPA
SSGGGSTPLWPEPLFSLVSGLVGMANPPTTSSQSSSASSPIASSASPSPVLSCSVQASDP
SPIYSAAPTFPNPGGADIFPEPSSQSFPSPSGASLQFPPPAYPTAKSGFQLPIIPDYLFP
PQPPPQPGDLGLGSVEQKPFPGPQPSLTPLSTIKAFATQSGGGGSCSGGTGTPQETKSLP
NSGGSYQATLVKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQ
KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKK
ADKGPSGPQAPSTSSPLAPYSASTGSTSYPSPAATSYPSPVPSSYSSPVTSYPSPVTSYS
PPVTSYSSPVTSYSSPVTSAFPSFPSPSVATSYASITSSTFHSQAGVGGSPYPSPGGHPS
PFSSSVTSTLPDLASTFSPRTIEIC
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccaaagccgagatgcagctcctgccttcgctgcagatggccgaccctttc
ggatccttcccgcactctccccctactatggacaccaactaccccaagctagaggagatc
atgttgctcgccggtggggggccacagttcctcaatcccgccggtggccccgagagcggc
ggcggcggcttcaatccctccggcgaaggcggggagcagtccttcgagcacctcgctgca
gacactttccccgagatctctctgaacggcgagaaatctttagcggagagcagctacccg
acccagactacccgcctcccgcccatcacctacaccggccgcttttctttggagccggcg
tcgagcggtggaggcagcaccccgttatggccggagcctctcttcagcctggtgagcggc
ctggtgggtatggctaacccgccgaccacgtcctcccagtcctcctccgcctcttcgccg
atcgcaagctccgcttctcccagcccggttttgagttgctcggtgcaggccagcgacccc
agccccatctactcagcggcgcccaccttccccaaccccggcggagcggacatcttcccg
gagccgtccagccagtcctttcccagcccgtcgggagcctcactacagtttccgcctccg
gcatacccgacggccaagagcggcttccagctgcccatcattccggactacctattcccg
cctcagccgcccccgcagccgggcgacctgggtctgggctctgtggagcaaaagcctttc
ccgggcccgcagccctcgctcacgccgctctccaccatcaaagccttcgctacccaaagc
ggcggcggcggcagttgcagcggcggcaccggcactccgcaggagaccaagagcctccca
aacagcggcggctcctaccaggcgacgctggtgaagcccagccgcatgaggaagtacccc
aatcggcccagcaagaccccgccacacgagcggccctatgcctgccccgtcgagtcctgc
gatcggcgcttctcgcgctcagacgaactcacccgccacatccgcatccacaccggccag
aagcctttccagtgccgtatctgcatgcgcaacttcagccggagcgaccacctcaccaca
cacattcgcacgcacactggcgagaagcccttcgcctgcgacatctgcggccgtaagttt
gcccgcagcgacgagaggaagcgccacaccaagatacacctccggcagaaggacaagaag
gccgacaagggccccagcgggccccaggcgccctcaacttcctcccctctggccccttac
tcggcctcgaccggctctacctcgtacccctcacctgcagccacctcctacccctcacca
gtgccctcctcctactcctcccccgtgacctcctacccatccccggtaacttcctactca
cccccggtaacttcctattcctctcctgtgacctcctattcctctcctgtgacttcggcc
ttcccctcgttcccctcgccctcggtggccaccagctacgcatcaatcacctcttccacc
tttcatagccaggcgggggtaggaggcagcccctatccttctcctggtggccaccccagc
cccttcagttcctcagtgacttcaacccttcctgacttggcctccactttctcgcctcgg
accattgagatctgttga
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