Thamnophis sirtalis (common garter snake): 106546397
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Entry
106546397 CDS
T06107
Symbol
DAZAP1
Name
(RefSeq) DAZ-associated protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106546397 (DAZAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106546397 (DAZAP1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106546397 (DAZAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106546397
NCBI-ProteinID:
XP_013918737
UniProt:
A0A6I9XX46
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MNSVGGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK
DPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGSRSDSKSHKIFVGGIP
HNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK
KVEVKRAEPRDSKSQTPGPTGTSQWGSRIMPSAANGWAGQPPPTWQQGYGPQGMWVPAGQ
ALGGYGPPPPGRGAPPPPPPFTSYIVSTPPGGFPPPQGFAQGYGTPPPFSFGYGAPPPPP
DQFAPPGVPPPPATPGATPLAFPPPPPPSQPTQDMNKPPAAQPDFPYSQFGYGQDLSGFG
QGFADPSQQPPSYGGPSVPPSSGPPAGGSGFGRGQNHNVQGFHPYRR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtcgggggcgccgacgagatcgggaaactatttgtaggaggcctagattgg
agcaccacacaagaaactctccgtagctatttttcccagtatggggaagttgtcgactgt
gtaataatgaaagataagactacaaatcagtcaagaggatttggatttgtcaagttcaaa
gatcccaactgtgtgggaactgtcctggccagcagaccccatacgttagatggccgaaat
attgatcccaaaccctgtacccctcgaggaatgcagcctgagagaacacgaccaaaggaa
ggatggaaaggatccaggagtgatagcaagtcccataaaatttttgttggtgggatccct
cacaactgtggagaaacggagctcagggaatacttcaagaagttcggagtggttaccgaa
gtggtaatgatctatgatgcagagaaacagcgaccccgaggttttggatttattactttc
gaggacgaacaatcagtggaccaggctgtcaacatgcattttcacgacatcatgggcaaa
aaagtggaggtgaagcgagccgaacctcgggatagcaagagtcagactccagggccaaca
ggcaccagccaatggggaagccggatcatgccaagtgctgccaatggctgggcaggacag
cccccacctacctggcaacaaggatacggacctcaaggtatgtgggtaccagctggacaa
gcacttggtgggtatggtccccctccaccaggtagaggagcgccacctccaccgccgcct
tttacctcgtacattgtttcgacacctccaggaggattcccacccccgcagggtttcgca
cagggatatggcacgcctccacccttcagctttgggtatggtgccccacctcctccacct
gaccagtttgctcctcctggtgttcctccaccacctgccacccctggggcaacaccactc
gctttccctccacctccaccaccatctcagccaactcaggacatgaacaagcctccagct
gcccaaccggatttcccctatagccagtttggatatggacaagacttgagtggctttgga
caaggctttgccgaccccagccaacagcccccctcctatggaggcccttcagtaccaccc
tcaagtgggccgcccgcagggggcagtggttttggccgtggacagaaccataacgttcaa
ggttttcacccctaccgacgctag
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