Thamnophis sirtalis (common garter snake): 106548469
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Entry
106548469 CDS
T06107
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
UreE_N
Motif
Other DBs
NCBI-GeneID:
106548469
NCBI-ProteinID:
XP_013921319
UniProt:
A0A6I9YB35
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Position
Unknown
AA seq
536 aa
AA seq
DB search
MPEPTKTAGSGISVQGPPGRPGSPGPKGDKGDAGVPGAPGIPGGDGSRISQGPPGPPGPP
GAPGVGISSMQEIQQYVAEYLQSDSIGRYLIGPQGPPGPPGPPGITIGAESLDYGELAHR
VMSYLSTSSSSSSLSSFSSSLSYENLLAMLQREDIRSYLTGPRGPPGPAGPPGLGGDSLA
LSLDYDELTRRVISYMTSSGTTIGLPGPPGPPGLPGTSYGDILTLLQDSEFRGIVGPPGP
PGPPGRSGSSVSTLTAEDISTYLQSMGYSLGAGPPGPPGPRGLPGPPGFSGTGVISPEYG
VWSDQFRSELIQYLTSDDVRSFIRGPPGPPGPPGPRGDGSFRAENYRSSVNSEGTYGRST
SSGLSYDASLATGESSSNLFRSNGGLRADESYAGTFGREGSQMSLIGEKGSYMRSYDGSL
DYNELASRVSENIQSRGLLQDIFTYHTQGPPGPPGPPGISKVFASYGNITADLMDFFRAY
GTIPGPPGPQGLMGYPGRKGDTGSMGPPGPQGPRGPKGEKGESVYSGRSRRQSTRA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccactaaaacagctggttctggaatttctgtccaaggaccacctggacgt
cctggatcacctgggcctaaaggagacaaaggtgatgcaggtgtaccaggagcccctgga
atccctggtggagatggatccagaatttctcagggccctccaggtcctccaggtcctcct
ggagctccaggagttggaattagttcaatgcaagagatccaacagtatgtcgctgagtac
ctacagagtgatagtattggccgttacctgattggaccacaaggcccacctggtcctcca
ggacctccaggaatcaccattggtgctgaatctttggactatggtgaattggcccatcgt
gttatgagctacctatccacttccagttcctcatcttctctatcttcattctcctcatca
ctgtcttatgaaaatcttcttgccatgctgcagagagaggacattcgatcatatcttact
ggacctcgaggtcccccaggtcctgctgggccacctggacttggaggagatagtttagct
ttgtcattggactatgatgagttaacaagacgtgttatcagctacatgacaagttctgga
actactattggacttcctggaccacctggtcctcctggtctgccaggaacatcttatggt
gatatcttaactttgcttcaagattcagaattcagaggcattgtggggccacctgggcct
ccaggccccccaggaagatcaggtagctctgtttccacccttactgcagaggatatctcc
acatatctacaaagtatgggatattccttgggtgctggtccccctgggccaccaggcccc
cgaggcctcccaggaccacctggtttttcaggaactggtgttatctctcctgagtatgga
gtttggagtgaccagttcaggagtgaattgatccaataccttacaagtgatgatgtacgt
agcttcatcagaggaccacctggacctccaggaccacctggaccaagaggagatggcagc
tttagggctgaaaattatagaagttctgtaaattcagaaggaacatatggcagatctaca
agttctggcttatcgtatgatgcatcattagccacaggagaatcaagcagcaatttgttc
agaagcaatggtggattacgtgcagatgaatcttatgctggaacatttggaagagaagga
tcacaaatgagtttaataggtgaaaaaggatcttatatgagatcctatgatgggtcattg
gattacaatgaattagcatccagggtctctgaaaacatacagagccgaggccttcttcaa
gacattttcacttatcatacacaaggcccacctggaccacctggcccccctggtattagc
aaagtgtttgcatcctatggcaatatcacagcagacctcatggatttcttcagagcttat
ggaaccattccaggcccacctggaccacaaggactgatgggatacccaggccgtaaaggt
gatactggatcaatgggcccaccaggcccccaaggaccaaggggtccaaaaggtgaaaaa
ggtgaatcagtgtacagtggtcgaagtagaagacaaagtacaagagcctaa
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