Thamnophis sirtalis (common garter snake): 106549743
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Entry
106549743 CDS
T06107
Symbol
ZC3H18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18
KO
K13092
nuclear protein NHN1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106549743 (ZC3H18)
Spliceosome [BR:
tsr03041
]
Common components
Common spliceosomal components
General mRNP proteins
106549743 (ZC3H18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
106549743
NCBI-ProteinID:
XP_013922938
UniProt:
A0A6I9YFC7
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MDVSETLEQNPRSPSEKDEEEDDHQPSDDENLKGSSSEQDGEEGRGASLGKGPNRATRTL
SHGEEEGLPSEEEERLSETKSPDSDRNDQSQPLKSSLRVEQVKEGANDLGDEASSVIREL
DEHELDYDEEVPEEPSTVPADDEADKAVGEEEEEEEEEKGDEPPGDDKQPTPKSNSEKEG
QEPPKEKKKEEDGEIDDGEIDDDDLEEGEVKDPNDRKMRPRLTCRFFVKGNCTWGINCRF
IHPGVNDKGNYSLITKPVPFSSNGAPPIGPGPHPLMPANPWGGPGVDEIFPPPPPDPPTE
SAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIGEDENEFDKENEFLRDWNYRITRD
VRETSDTDVKENANFGLDPYADPYYDYEIERLWRGGQYENFRVQYTDPDPYRNYRLSKER
ERERDRENRQRERERERERERERERRQRERERERERERDKERQRRKEEWERERERIKRDD
KERPHRDRDREREKEREKEKEKPKPRSPQPASRQPEPLKKEKEATTTTTTTPSHSKRADE
WKDPWRRSKSPKKKHGMSASPSHARRRRKASASSASGSGSSRSSSRSSSYSGSGSSRSRS
RSSSYSSYTSRSSRHSSFSGSRSRSQSFSSSPSPSPTPSPHKPPPKVKGESAVLAGKGEK
IVKKLPAPPAPPPVAKVAPSAPEPAKPGDNREARRKERQTRTPPRRRAVSCSGSGSSYSG
SSGSRSLSRSLSHSRSRSSSASLSPSPSGSRKSRSLSVSSVSSASSASSSSSSIRSADSE
DMYADLASPVSSASSRSPTPAQQKKERGKAKKESGPKEEKRKRDVPAQPAKSAKPASGGK
SQQPPAPHPPPQAQPAGFSAHKEIKLTLLNKAADKNSSRKRYEPSDKDRQASPPTKRINL
SPGIRDRKLAGRLSSPKQDRQRGPNPKPSPAQADKKRPLSPPSKSSSKVTSIPGKAAEPA
PPAAPAKSGKSSTLSRREELLKQLKAVEDAIARKRAKIPGKV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctgaaacacttgagcaaaacccccgctctcccagtgagaaagacgaagag
gaggatgaccaccagccctctgatgatgaaaacttgaaagggagtagttcagagcaggat
ggggaggaaggacggggtgcctccttgggaaaaggtccaaatcgggcaactagaacattg
agccatggggaggaggaaggccttccctcagaggaagaggagcgtttaagtgaaaccaag
tctccggactctgatcgtaatgatcaaagccagccactcaagtcctccttgcgtgttgag
caagtgaaagagggggcaaatgacttgggtgatgaagcctcctcggtcattcgggaactg
gatgagcatgaactggactatgatgaggaggttcctgaggagcccagcactgttcctgca
gacgatgaggccgacaaggctgtgggggaggaggaagaggaagaggaagaagaaaaggga
gacgagcctccgggagatgacaaacagcccacccccaaaagcaacagtgagaaggaaggg
caggagcctcctaaggagaagaagaaggaagaagatggagaaatcgatgacggcgagatt
gacgatgatgacctggaggagggagaggtgaaagatcccaatgacagaaaaatgaggcca
cgtctcacctgccgtttctttgtgaaagggaactgtacttggggcataaactgccgattt
attcatcctggtgtgaatgacaaaggaaactactctctcattaccaagccagtccctttc
tcttctaacggtgcccctcctattggccctggtcctcacccactgatgccagccaaccct
tggggagggcccggtgtggatgaaatcttccctcccccacctcctgaccctccaacggaa
agtgcctgggaacggggcctccgacacgccaaggaggtgctgaaaaaggctaccataagg
aaagaacaagaacccgattttgaagaaaaacggtttacagtaacgatcggggaagatgaa
aacgaattcgacaaggagaacgaattcttacgagactggaactaccgcatcacccgggac
gtgcgggagacaagtgacacagacgtcaaagagaacgctaattttggcctcgatccatac
gccgatccctactacgattatgaaatagaacgcctctggcggggaggacagtacgagaac
ttccgggtacagtacaccgatccagacccctaccgcaactacaggctgagcaaggaaagg
gagcgagagagggatcgggagaaccggcagcgggaacgggagcgcgagagggagcgggag
cgggagcgagagaggcggcagagagagcgggagcgtgaaagggaacgggagcgggacaag
gagcgccagagacggaaagaagagtgggagagggagagggagcgcatcaagcgagatgac
aaggaacgcccacaccgggaccgagatcgggaacgggagaaagagcgcgagaaagagaaa
gagaagccaaaacctcgatcgccacagccagccagccgtcagcctgagccattgaagaag
gagaaggaggcaacaacaacaacaacaaccactccttctcattccaagagagcggatgag
tggaaggacccttggcgccgatcaaaatcgcccaaaaagaagcacggcatgtccgcttcc
cccagccacgcgaggaggcgccggaaagcctcggcttcgtcggcttccggctcaggttct
tcaaggtcatcctcccgctcctcctcctactctggatcaggttcttcgcgatcacgttcc
agatcgtcctcctacagctcctacactagtcgctcttccaggcacagctccttctcaggc
agccggtccaggtcgcagtccttctcctcttcaccgtctccttctcccacgccatctcca
cacaagcctcctccgaaagtcaaaggggaatctgcagtcctggctggaaagggtgaaaag
attgtgaagaaactacctgccccaccagcacccccaccggtggcaaaggttgccccctct
gccccagagccagccaaaccaggggacaaccgggaggcaagacggaaggagcggcaaacg
aggacacctcccaggaggcgggccgtcagttgcagtggcagcggcagcagctacagcggt
tccagcggttccagatccttgtctcggtccctctcccactctcggtcccggtcctcctcg
gcctcgctctccccgtccccatccgggtccaggaaatccaggtctctgagcgtcagcagc
gtctcgtctgcctccagtgcctcctccagcagcagctccatccggagcgccgactcagaa
gacatgtatgcggatctggccagcccggtttcttcggctagctcccggtccccgacccca
gcccagcagaagaaagaaagaggaaaagccaagaaggagagcggccccaaggaggagaag
cggaagcgggacgtcccagcgcagccggccaaatccgccaagccagcctcaggggggaag
tctcagcagcctcccgcccctcacccgcccccccaggcccagcctgctggcttcagtgcc
cacaaggaaatcaagctcacccttttaaacaaggcagctgacaaaaacagcagccggaag
aggtacgagccctccgacaaggaccggcaggcttctccccccaccaagaggatcaacctg
tctccaggtattcgcgacaggaaactcgccggaaggctctcctctcctaaacaggaccgt
cagcgggggcccaacccaaagccctccccagcgcaggctgacaagaagcgcccactctcc
cctccgtcgaagagctccagcaaggtcacgagcatcccaggcaaagcggctgagccggcc
cctccagctgcccccgccaaatcgggcaagtccagcacgttgtcgcgaagggaggagctc
ctgaagcagctgaaggccgtggaagacgccatcgctcggaagcgggccaagatccccggg
aaagtatag
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