Thamnophis sirtalis (common garter snake): 106550085
Help
Entry
106550085 CDS
T06107
Symbol
EMILIN1
Name
(RefSeq) EMILIN-1
KO
K24246
emilin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106550085 (EMILIN1)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
106550085 (EMILIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMI
Baculo_PEP_C
C1q
Collagen
Apolipoprotein
DUF948
DUF1664
ATG16
ATG17_like
AATF-Che1
Laminin_II
FapA
DUF4200
Prominin
DUF16
PhaP_Bmeg
TEDC1
Gp58
Mis12
CENP-K
Motif
Other DBs
NCBI-GeneID:
106550085
NCBI-ProteinID:
XP_013923352
UniProt:
A0A6I9YGP0
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MAGPGATAWLYIWWGLLAREVWGMNYPPRYNLYTGNNLPFTQLQGAAQATNGARVASRHR
NWCAYVVSRTVSCVVEDGVDTYVKPDYQPCVWGQLQCPRVVTYRSFVRPRYKVAYKMVSD
LEWRCCPGYSGDDCAESGTLLTTNRPRPQPGRPNLSGFGNPLSGGEGHRDSAKVQQLEEK
VQSLTKQLQDLQSTMQANNAKLTEDVRRAAENGKQQPADAAAHPEMKETLNEIQRHLQRL
DNRIANHENGRGAGGGGGGTDVRGEVLREVERRLQNSCAACLSGVEALKRQQAEDRDRLR
ALEKLVSSLDQRNREAVSGVQQQVSRLAEQLSKACCHQLESRVGELERGLETVSDSVAAL
NEHAGGRPQPSAQPQPPWNVDRRMTEVESRVNTTQRGLLEHLEDVQVMLHGAADRLSRAE
RQLDFLFSRLNDFQSHVGRALANLSRDVGGLKDSSLQQQGALERVRVSVHACTQICTEPD
NQDSQISSILSDLERRVLDNEGQLRLLGSNLHQLDISGKLRNLQGLVGSNSEALGKLAGE
IGELENRVVISMSAGPPDLIRYSNRTNQRLDKLEQGVERLEHHPCSQSCSQLWGEMVQLR
EQVESCRTACRPMGGKPELGTEEGETSKPLDGFSVIGGSSTVHLQSLQGELSEVILGFSS
LNETLAGLQATVEKHETDIHELGTTKDRIITEINRVQQEVTDHVGESDGRFQDLGHEIQR
FSGTLQVEASDCRRASGGLAERLTKLEGTCERLDHVSGSLRKIKEGLDKHISALWGCIHE
VNGTLRSHGALLEKIHGSQLGTIHRHLSTLNGSLHTLKGQLHDLTLQDFTGPPGFPGPMG
KQGPPGLMGPPGKDGKTGIEGPPGFPGKQGPPGPPGRMPKVAFSAALTTWNFNTGTIIFN
KELVNDGNFYNPRTGTFTAPVSGRYLVSAILTGHRGEKVEAVLSLSNRAIARSDSAGYQP
EGLENKPVAESQPSAGALAVFTLIVPMESDDTLCVDLVSGQLAHSPDEPLTVFSAALLYE
EDLGVHRVPQWG
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggccggccctggggccaccgcatggctctacatttggtggggcctcctggccagggag
gtctggggcatgaactaccctcccaggtacaatctgtacacaggaaacaacctgcctttc
acacagctccaaggggcagcacaagcaaccaatggggcccgggtggccagccgccacagg
aattggtgtgcctatgtggtatcccggactgtgagctgtgtggtggaggatggagtcgac
acatacgtgaaaccagattatcagccatgtgtttggggacaactccagtgtcctcgtgtt
gtcacgtaccggagttttgtgcgcccccgttataaggtggcctacaagatggtctcagat
ttggagtggcgctgctgccctggctattcaggtgatgactgtgctgaaagcgggacgctc
cttactaccaaccgaccacgtcctcagcctggtcgacccaacctctctggctttggcaac
ccactcagtggtggtgaaggacaccgggactcggccaaagtccaacagctggaagaaaaa
gtgcagagcctaaccaagcaactacaagacttgcagtccaccatgcaggccaataacgcc
aagctgaccgaagatgtgcgccgggcagctgagaacggcaaacagcagccagcggacgcc
gccgcacacccggagatgaaagaaaccctcaacgagatccagcgccacttgcaacgcctc
gacaaccgcatcgccaaccacgagaacgggcgaggcgcgggcggcggcggcggcgggacg
gacgtccgaggcgaggtcctgcgcgaagtggagcggcgcttgcagaattcctgcgccgcc
tgcctgagtggcgtggaggcgctgaagcggcagcaagccgaggaccgcgaccgactgcga
gctctggagaagttggtctcctccctggaccagcggaaccgcgaagccgtgagcggcgtc
cagcagcaggtgagccgcctggccgagcagctgtccaaggcgtgctgccatcagctggag
agccgggttggcgagctggagcgcggcttggaaacggtctccgattcggtcgccgccctg
aacgagcacgcgggaggccggccgcagccctcggcccagccgcagccgccctggaacgtg
gacaggcggatgaccgaggtggagagccgcgtcaacaccacccagcgcggcctgttggag
cacttggaggacgtgcaggtcatgctgcacggggcggccgaccgactgagccgggccgag
aggcagcttgacttcctcttctcccggctgaacgacttccagagccacgtgggccgagct
ctggccaacctgtcgcgggacgtcggcgggctgaaggacagcagcctgcagcagcagggg
gcgctggagagggtccgcgtctccgtccacgcctgcacccagatctgcaccgagccggac
aaccaggactcgcagatcagcagcatcttaagcgacctggagcggcgcgtgctggacaac
gagggccaactgcggctcctgggctccaacctccaccagctcgacatctcggggaagttg
cgcaacttgcaaggcctggtggggtcgaacagcgaagccctcggcaagctggcgggagaa
attggcgagcttgagaaccgggtggtgatttccatgagtgcggggccgccggatttaatc
cgctattccaatcgcaccaatcagcgcttggataaactggagcaaggggtcgagaggttg
gaacaccatccctgcagccagagctgctcccagctatggggagaaatggtgcagcttagg
gagcaggtggaaagctgtcgaacagcctgccggccaatggggggaaagccagaactgggt
acagaggaaggggagacttccaaacctttggatggcttcagcgtgattggcggcagctct
acggtccaccttcagtcgttgcagggagagctctccgaggtgatcttgggcttcagctcg
ctcaacgagaccctggcagggctgcaggccaccgtggagaagcacgaaacggacatccac
gaactgggcacgaccaaggatcgcatcatcacggagatcaaccgcgtgcagcaggaggtg
acggaccacgtgggcgagagtgacgggcgcttccaggacctgggtcatgagatccagcgg
ttcagcggtaccctgcaagtggaggcctcagactgtcggagggcctctgggggtctggca
gaacggctgaccaagctggaaggcacctgtgaacgactggaccacgtctcggggagcttg
cgcaagattaaagaagggctggacaagcacatctcggccttgtggggctgcattcatgaa
gtgaatgggactctgcgcagccacggcgccttgttagagaagatccatggcagccagttg
ggcaccatccaccgccacctcagtaccctcaatggctcccttcatactctgaagggtcag
ctgcatgacctcaccctgcaggacttcacaggccctccgggttttccaggccccatggga
aagcagggccctccaggcctgatgggacctcctggcaaggatggaaagactggcatagag
ggacctccagggttccctggaaaacaaggaccaccaggtccacctggaagaatgcccaaa
gtcgccttttcagcagctctgacaacctggaatttcaatactggaaccatcatctttaac
aaggagctggtgaacgatggcaatttctataacccacgcacaggaactttcacagctcct
gtttctggccgttatctggtcagcgcaattttgaccgggcacagaggtgagaaggttgag
gcagtgctctcactttccaacagggccattgcccgcagcgactcagctggatatcaacct
gaaggactggagaacaaaccagtggccgagagccaaccaagtgctggtgctttggcagtc
ttcactctcattgtccccatggagtctgatgataccctctgtgtggacctcgtgtctggc
cagctagcccactctccagatgaaccactgacagttttcagtgccgccttgctttatgag
gaagatttgggggtccatagggttcctcaatgggggtag
DBGET
integrated database retrieval system
