Thamnophis sirtalis (common garter snake): 106550909
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Entry
106550909 CDS
T06107
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214
KO
K14317
nuclear pore complex protein Nup214
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106550909 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106550909 (NUP214)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106550909 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40
NUP214
Motif
Other DBs
NCBI-GeneID:
106550909
NCBI-ProteinID:
XP_013924374
UniProt:
A0A6I9YK28
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MGDDMDVIPEREMKDFQFRALKKIRIFEAPEDLPKERGNLLVVSNKYGLTFTGCAAGLQI
FQTKNLLMQIQAGDSPNKIVENIQGLFVPTKFWVHHLALSCDNLTLSVCMASNEVGSFIG
FFDVRTFVNQAKQQKRPFAYQKMGGALVNDLKWNPVNATMLAVCLSDGSVSVLQVMETVK
VYATLPASVAVTSVCWSPKGKQLAVGKQNGTVVQYLPNLQEKKTIPCPPFYVADNPVKVL
DVLWIGTYVFTIIYAAADGNLETSPEVVMALLPKKEEKRPELFVNFMEPCYGSCTERLHH
YFLNFVEDWDLVLLASAASTEVSILSRQGDQTNWELWVLEDSSRAELPVTDKSDDSLPVG
VAIDYSNNTPITISEDKTLDPAPVLMLLSTDGVLCPFYMVNQNPGVRSLLVAPEPLSAEG
ERGAKTTGATAPSAAPKSDAPPAPPAPGPPLVPSSGATTPFSFASPPLKAPGPAPSPSLP
YPFPSEAPAAAPGPSTSKASEFPSPAAPKAPQTPIVPSGLVPVSAPSFSFGSVSFKSRVD
GPVPPTATKPSFAPAVSSVKVNLNEKFAAAAAESAAPSVSASQVPFLFPPAAKSTPAGAL
GLATPPPAPIKASTPVTSATRLPQSAPAASGLQKAAKISPVAAKLSPSQGRQQQPSGVGV
EKQPCQWKETDPVIVGIREEMAHFQKELEELKARTAKASFQVGSEEEKKQLRMEATDLHT
FLLEIKETTESLHGDISLLKTNLLEGFAGVEEAQEKDEQAHNSEYLHLLYKKPLDPKSEG
QLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQQKKQKRLAVPERETLFNALTNNREIIN
QQRKRLKKLVDSLYELRLYNHVTPWNASAQGSSHTSIQSLESELENLSNALTKATLESST
KASSPSAAKLSVVKQSQLRNFLSKRKLPPVRSTAPATLSQSAFLSLRYDEDLDEISSASS
VAQSLENEETEGVDQEEVEVVVPVPAPRHAPVVRTPSIQPALLSQPLHLGKPHVTMGTLS
ESIAAFRELSAGEIRG
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacatggacgtgatccccgagcgggagatgaaggattttcaattccgggcc
ctgaagaaaattcggatcttcgaagcccctgaggatctgcccaaagaacgtggcaacctg
ctggttgtgtccaacaaatatgggctgaccttcaccggttgcgcagccggactgcagatc
tttcagacgaaaaacctgcttatgcagattcaggctggagattctcctaataaaatagta
gagaatatccagggtctttttgtcccgacaaagttttgggtgcatcacttggcgctcagc
tgtgataacctcactctgtcagtttgcatggcctcgaatgaagttggctctttcattggc
tttttcgacgtccgcacctttgtgaatcaggcgaaacagcaaaaacgaccgttcgcttat
caaaagatgggaggcgctttggtcaacgaccttaagtggaatccagtgaatgccacaatg
ttagctgtctgtctgtccgatgggagcgtctccgtcctgcaggtgatggaaaccgtaaag
gtctacgccacgcttcctgcttcagtggccgtcacatctgtgtgttggagtcctaaaggg
aaacagctggcagtaggcaagcagaatggcacagtggtccagtatctgccgaacttgcag
gaaaagaaaacaattccttgccctccattctacgtggcagataatcctgtcaaagtcctg
gatgtgttgtggattggcacttacgtcttcaccatcatttacgccgcagccgacggcaac
ttggaaacttctcccgaagtggttatggccttgttgccgaaaaaagaagagaagaggcct
gagctcttcgtaaactttatggagccttgttatggcagttgcaccgagaggctccatcac
tacttccttaacttcgttgaagactgggatctggtcttattagcttctgccgcttccacc
gaagtcagcatcctgtcaagacaaggggatcagaccaactgggaactgtgggtgttggag
gactccagtcgcgcagagcttcccgtgacagataaaagcgacgattccttgcctgtcgga
gtcgccattgattatagcaacaacacgcccataactattagtgaagataaaactttggat
cctgctccggtcttgatgttgttatccacagacggggttttatgccccttttacatggtc
aatcaaaaccccggcgtccgatctctcctggtggcccccgaacctctctctgcagaaggg
gagaggggagcgaaaaccacaggcgccacggctccttcggctgctcccaagagcgacgct
cccccagcccctccagccccaggtccccccttagtcccaagcagtggggccaccaccccc
ttctcttttgcaagccccccgctcaaggcccctggcccggctcccagtccttctctgcct
tatccgttcccatcggaggccccagcagcggctcctgggcccagcaccagcaaggcctcc
gagttcccttctcccgccgccccgaaagcaccgcaaactcccatcgtcccgtctggcctc
gtcccggtttccgctccatctttctcctttgggtcggtgagcttcaagagccgtgtcgac
ggacccgttcctcccacggcgactaagcccagctttgcgccagcggtatcctccgtcaag
gtcaacctcaacgaaaagttcgctgctgccgctgccgagtctgctgccccttccgtcagc
gccagccaagtgcccttcctctttcccccggctgcaaaatctacccctgcaggagcccta
ggcctggccacgcctcctcctgcccccatcaaggcttctaccccagtgacttcagcaacg
cgtctaccacaaagcgctcccgcagcttcgggccttcagaaagcggccaagatatcacca
gtggctgcaaaattgagcccttcgcagggtcggcagcagcagccttccggtgttggggtg
gagaagcagccctgccagtggaaagagacggatcctgtcatcgtcgggataagagaagag
atggcccatttccagaaagagttggaggaactgaaggctcggacggccaaggcctcgttc
caggtgggcagtgaggaggagaagaagcagctgcgcatggaagccaccgacctgcacact
ttcctgctggaaatcaaagagaccacagagtcccttcatggagacatcagcctcctgaag
accaacctcttggaaggctttgcaggggtggaggaagcccaggagaaggacgagcaagct
cacaactcagagtacttgcacctgctttacaagaagcccttggaccccaagagcgaaggg
cagcttcaggaaatccgtcgcttgcatcagtacgtgaagtttgctgtccaagacgtgaac
gacgttctggatttggagtgggatcggcacctggaacagcagaagaagcagaagcgttta
gctgtccctgagcgagagactctcttcaacgccctcacgaacaaccgggagatcatcaac
cagcagaggaagaggctgaagaagttggtcgacagcttgtatgagctccgtttatacaac
cacgtcactccgtggaacgcgtccgctcaaggctcttctcacaccagcatccagagcttg
gagagcgagctggagaatctgagcaacgccttaacgaaagccacgctggaatcttccacc
aaagcatcatctccctcagctgctaagttgtccgttgtgaagcagtctcagctgaggaat
ttcttgtctaagagaaaactgccccctgtccgctcgacagcaccagccactctgtcccag
tcagctttcctgtctctgagatacgatgaagacctggacgagatcagctctgcctcttca
gtcgcccagtccttggagaacgaggagacggaaggggtggatcaggaggaagtggaggtg
gtggtaccagtcccagcacctcgccacgccccagtcgtccggacaccttcaatccaaccc
gccctgttgtcgcagcccctgcatcttggcaaaccccacgtcacaatgggcactttgagt
gagtcgattgcggcatttagagagctttccgcgggggagattagaggttaa
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