Thamnophis sirtalis (common garter snake): 106551002
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Entry
106551002 CDS
T06107
Name
(RefSeq) programmed cell death 6-interacting protein-like
KO
K12200
programmed cell death 6-interacting protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03250
Viral life cycle - HIV-1
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106551002
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106551002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106551002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106551002
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
106551002
Exosome [BR:
tsr04147
]
Exosomal proteins
Proteins found in most exosomes
106551002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALIX_LYPXL_bnd
BRO1
Snapin_Pallidin
TCAD2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
106551002
NCBI-ProteinID:
XP_013924473
UniProt:
A0A6I9YJD5
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MKAAAKFYQFASGAFQHIKDTVLSSLNREPTVDISPDTVGTLSLIMLAQGQEVFFLKATR
DKMKDAIIAKLTNQAADYYGDAFKQCQYKDTLPKEVFPLLAAKHCIMQAHADYHQSVLAK
QQKKFGEEIARLQHAADLVKTVTSRYDEYVNVKDLSDKINRALTAAKKDNDFIYHDRVPD
LKDLEPIGKVSLVKATSITLPLSQKFTDLFEKMVPMAVQQALAVYNQRKADLVNRSIGQM
REATNLANGVLASLNLPAAIEDVSGDSIPQSILQKSKSVIEQGGVEAIDQLMKDLPELLQ
RNREILDESLRILDEEEATDNELKNKFKERWQRTPSNDLYKSLRAEGTNFRNVLDKAVQA
DKQVKERYQSHRDTISLLSKSEQELNAAIPSANPAKTIQGSEVVNILKSLLASLDEVKKQ
REQLENDLKSVNFDMTSKFLTALAEDGALNEEAISVTELDNLYGGLTHKVQETLRKQEEL
LNTIQNSHQEFSKMKQSNNESNLREEVLKNLAIANDNFVELTANLKEGTKFYNELTEILL
KFQNKCSDIVFARKTERDELLKDLQQTIAREPSAPSFPSVPAYQTVPSGGNKPSASSTPT
PAPRTNMSSKPQPPARPPPPAISIAPVVTAPGSATTGISSAPVGSAANLTPSQAQGPPYP
TYPGYPAYCQMPLPLTYNPYIYGQYNLPYTPSPAYQNPGQASYPGPPQQPGYPYPQQPYY
PQQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgctgctaaattttatcagtttgctagtggtgctttccagcatattaaagat
accgtcctctcttcattaaatcgagaacctacagttgatatttctccagatacagttggt
acactaagtcttatcatgctggctcaaggtcaagaagtttttttcctgaaagctaccaga
gataaaatgaaagatgcaatcatagctaaacttacaaatcaagctgctgattactatggc
gatgcattcaaacagtgccagtacaaggataccttacccaaggaggtgttccctcttctg
gctgcaaaacactgcataatgcaagcccatgcagactaccatcaatctgtactggcaaag
caacagaagaaatttggtgaagaaattgcaagattgcaacatgctgcggatcttgtaaaa
acagtgacatctcgttatgatgaatatgtaaatgttaaagacctgtctgacaaaatcaac
cgtgcacttactgctgcaaagaaggataatgacttcatctatcacgatagagttcctgat
cttaaagatcttgaaccaataggaaaagtcagtcttgtgaaagcaacttccattactctc
cctctgagtcagaaatttacagatttgtttgagaagatggttcctatggcagtacagcaa
gctcttgctgtctacaaccaaagaaaagcagacttggttaatagatcaataggccagatg
agagaggccaccaatttggcaaatggagtgctagcatcccttaatcttcctgctgctatt
gaagatgtttctggagatagtattcctcaatccattctacagaagtctaaatcagtgatt
gaacagggaggtgttgaagcaatagatcagttgatgaaagatcttcctgaattgttgcaa
agaaatagagagattctggatgagtcactaaggatattggatgaagaagaagcaacagat
aatgagttgaaaaacaaattcaaggaacgttggcaaagaacaccatcaaatgatttatac
aagtctttgagggcagaaggaaccaatttccgtaatgtactggataaagcagtacaagct
gacaaacaggttaaggaacgataccaatctcatcgagatacaatttcattgttatctaaa
tcagaacaagaacttaatgcagccattccatcagcaaatccagcaaaaacaatacaaggg
agtgaggtagttaacatcctaaaatcgttgctagctagtctggatgaagtaaaaaagcag
agagaacaacttgagaatgatctcaaatcagtaaactttgacatgacatctaaattccta
acagcactagcagaggatggtgctttaaatgaagaagccatttctgtcacagaattggat
aatctttatggtggtcttactcataaagtacaggaaaccctgagaaaacaagaggagctg
ctcaacaccattcagaattctcatcaggaattttctaagatgaagcagtcaaataatgaa
tccaatttaagggaagaagttctgaagaatttagctatagctaatgacaactttgtggaa
cttacagccaacttaaaagaaggcacaaagttctataacgaattgactgaaatccttttg
aaattccaaaacaaatgcagtgacattgtgtttgcccgcaaaacagaaagagatgaactt
ctgaaagatttgcaacagactattgccagagaacccagtgctccttcttttccttctgtg
cctgcatatcaaactgttccctctgggggaaacaagccctctgcatcctctactccaact
ccagctccccgaaccaatatgtctagtaaacctcagccaccagcacgccctcctccacca
gcaatttctatagcacctgtagtgactgctcctggttcagcaaccactgggatatcatct
gctcctgtgggttctgcagctaatctaacaccttcacaggcccaggggccaccttatcca
acctatccaggatatcctgcatattgtcaaatgcctttgccattgacctataatccttat
atatatggccaatacaatcttccatatacaccatcacctgcgtaccaaaatcctggacaa
gcttcttatccaggtccaccacagcaacctggatacccttatccacaacagccatattat
ccacagcaataa
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