Thamnophis sirtalis (common garter snake): 106551066
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Entry
106551066 CDS
T06107
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106551066 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106551066 (SMARCD2)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106551066 (SMARCD2)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106551066 (SMARCD2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106551066 (SMARCD2)
PBAF complex
106551066 (SMARCD2)
GBAF(ncBAF) complex
106551066 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
106551066
NCBI-ProteinID:
XP_013924549
UniProt:
A0A6I9YKI4
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAGRGGFPLTPPPPEGPSAAVSVAAGVPSPAIPAPGSGLLRGPSPAGAGTYRPMGHGPQF
QRPGMLPGGRMPMAGLQVGSPSGSPYGTASSMRPGMPPSLMDPFRKRLLVPQAQPPPALT
QRRGLKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQ
KRKLRIYISNTFTPGKEESEGGERIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLG
VHTQTRASIMQALWLYIKYNKLQDCHEKEYINCNRYFRQIFNCSRMRFSEIPMKLAGLLQ
HPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDIKIHE
TIESINQLKTQRDFMLSFSNNPQDFIQEWIRSQQRDLKIITEVAGNPEEERRADFYQQPW
MQEAVGRHIFAKVQQRRQELEQVLGVRLT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccggacgcggcggctttcccctgactccgccgcccccggagggaccatcggcggct
gtctcggtggcagcgggcgtcccttctcctgctatcccagcaccgggcagcgggcttttg
cgaggacccagtcctgctggggctggtacttatcggcccatgggccacggacctcagttc
caacgtcctggaatgttgcccggtggaaggatgcctatggcaggattacaagtgggatcc
ccttcaggctctccatatggtacagcctcttcaatgagacctggaatgccaccatccctg
atggatcccttccgaaagcgtctacttgttcctcaggcacaaccacctccagcacttaca
caaaggcgaggattgaaaaggcggaagatggctgacaaaatcctgccacagaggattcgt
gaattagttcctgagtctcaggcatacatggatttactggcttttgaacgcaagctggac
cagacaattgcccgcaaaagaatggaaatccaagaggcaatcaagaaacctttgacgcaa
aagcggaagctgcgtatttacatctctaacacttttactcctggcaaagaggagtctgag
ggtggtgagcgtatagcctcatgggaacttcgtgtggaaggcaaacttcttgatgatcca
agtaaacagaagagaaaattctcatcctttttcaagagcttggttattgaactagacaaa
gaattatatggaccagacaatcacctcgtggagtggcatcggatgccaacaacccaagag
acagatggctttcaggtcaagcgccctggtgatgtgaatgtaaaatgcactctgcttctc
atgctggatcatcagcctcctcaatacaagctagatccacgtctggctcgccttcttggt
gtccatacccagacccgtgccagcataatgcaggctctatggctctatatcaaatataac
aaactccaggactgtcatgagaaagaatatattaactgcaaccgctactttcgccagatc
ttcaactgcagccgtatgagattttctgagattccaatgaaactggcaggactcttacaa
catccagatcccattgttatcaatcacgttatcagcgtggaccctaacgatcaaaagaaa
acagcctgttatgacattgatgtggaagtagatgatcctttgaaagcccaaatgagcaac
ttcttggcctccacaactaatcagcaagaaattgcttccctggatatcaagattcatgaa
acaattgaatctattaatcagttgaagacacaacgagattttatgctgagttttagtaat
aatcctcaggattttattcaggagtggatcagatctcaacaaagagatttgaagattatc
acagaggtggctgggaacccagaagaagagagacgggctgatttctatcagcaaccatgg
atgcaagaagctgttggacgacacatctttgcaaaggttcagcagcgcagacaagaactg
gaacaagtgcttggtgttcgccttacttag
DBGET
integrated database retrieval system
