Thamnophis sirtalis (common garter snake): 106551332
Help
Entry
106551332 CDS
T06107
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106551332 (FUBP1)
03041 Spliceosome [BR:
tsr03041
]
106551332 (FUBP1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106551332 (FUBP1)
Spliceosome [BR:
tsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106551332 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
DUF1897
KhpA-B_KH
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
106551332
NCBI-ProteinID:
XP_013924901
UniProt:
A0A6I9YL90
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MSDYSTVPPPSSGAAGGGGGGGGAVNDAFKDALQRARQIAAKIGNESGTSVNSNDYSYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPEPKKVAPPNNDSFGNQLPPMHQQQRSVM
TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK
RLLDQIVEKGRPTPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM
IQDGPQNTGADKPLRITGDPYKVQQAKEMVLDLIRDQGGFREVRNEYGSRIGGNEGLDVP
IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD
LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS
ISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHG
PHGVVPGPHGPPGPPPGAPMGPYNPAPYTPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPADPNSAAWAAYYAHYYQQQAQPPPAAPPSAPPATQTNGQGDQPNPAPAGQVDY
TKAWEEYYKKMGQQGQPQDYSKAWEEYYKKQGQAVPAPTGAPPAGQPDYSAAWAEYYRQQ
AAYYAQTSPQGMPQHPPAPQVNSLELFS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattattctacggtgccccctccttcttcgggagcagccggcggaggcggagga
ggtggcggggcagtcaatgatgcttttaaagacgcgctgcaacgggctaggcagattgca
gcaaaaattggaaatgaatcagggacatctgtgaattcaaatgattacagttatggggga
caaaaaagacctcttgaagatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagaacctaagaaagttgctccccca
aacaatgattcttttggaaatcagttaccacccatgcatcagcaacagaggtctgtaatg
acagaagaatacaaagttccagatggaatggttggattcataattggcagagggggagaa
cagatatctcgcatacagcaagaatctggatgtaaaatacagattgcacctgatagtggt
gggcttcctgaaagatcttgtatgttgactggaacacctgaatcagtacaatctgcaaag
agattgctcgaccagatagttgaaaaaggaagacctactccaggattccatcatggtgat
ggcccaggaaatgctgtccaggaaatcatgattccagctagcaaagcaggattagttatt
ggaaagggtggagaaactataaagcagcttcaagagcgtgcaggtgttaaaatggtaatg
attcaagatggaccacagaacactggagcagataagcctcttaggatcacaggagatcct
tacaaagtccaacaagcaaaggaaatggttttagatctaattcgtgatcaaggtggcttc
agagaggtacgaaatgaatatggatcaagaataggaggcaatgaaggattagatgtacca
ataccacggtttgcagttggtattgtaattggaagaaatggcgaaatgataaaaaagata
cagaatgatgctggtgtaaggattcagtttaaaccagatgatggaacaacacctgataga
atagcacagatcacaggaccaccagacagatgtcagcatgcagctgaaattattacagat
cttcttcgaagtgttcaggctggcaatcctggaggtccagggcctggtggtcgtggtaga
ggaagaggtcagggaaattggaatatgggaccacctggtggactgcaagaatttaacttt
attgttcccactggaaaaactggattaatcattgggaaaggtggtgaaactatcaagagc
attagtcagcaatctggtgcaagaatagaacttcagaggaatcctccaccaaatgcagat
cccaacatgaaattatttactattcgagggacaccacaacagattgattatgctcggcag
cttatagaagaaaagattggaggtccagtaaatcctttggggccccctgtgcctcatgga
cctcatggtgttgttcctgggccacatggaccccctgggccacctcctggggctccaatg
ggaccttacaatccagctccttatactcctggccctcctggtcctgcacctcatggacct
ccagcaccatatgctccacaaggatggggtaatgcatatccacattggcaaccaccaaat
cccccagaccctggtaagccagcagatcctaattcagcagcatgggcagcctattacgcc
cactactatcaacagcaagcacagccaccccctgcagctccacctagcgcaccacctgcc
actcagactaacggacaaggagatcaaccaaatccagcaccagcagggcaggtagattat
accaaggcttgggaagaatactataaaaaaatgggtcaacaagggcagccacaagattat
tcaaaggcttgggaggaatattacaagaagcaaggtcaagctgttccagctccaactgga
gccccaccggcaggtcagccagattacagtgcagcatgggctgagtactatcgacagcag
gcagcttattatgcccagacaagtccacaaggaatgccacaacatcctccagcaccacag
gtaaacagtcttgaattatttagctaa
DBGET
integrated database retrieval system
