Thamnophis sirtalis (common garter snake): 106552028
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Entry
106552028 CDS
T06107
Symbol
TCERG1
Name
(RefSeq) transcription elongation regulator 1 isoform X1
KO
K12824
transcription elongation regulator 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106552028 (TCERG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106552028 (TCERG1)
Spliceosome [BR:
tsr03041
]
Complex A
U1 snRNP components
U1 related factors
106552028 (TCERG1)
Complex B
106552028 (TCERG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
106552028
NCBI-ProteinID:
XP_013925686
UniProt:
A0A6I9YNF4
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MPPPMPPPPGMMFPPGMPPVSAPGTPTMPPNDEIWVENKTPDGKVYYYNARTRESAWTKP
DGVKVIQQSELTPILAAQAQAQAQAQAQAVGASTPTTSSPASAISTSTSSSSLSSTTSTT
TTATSVSQTVSTPTTQDQTPSSAVSVATPSVSVSTSAPSATPVQTVPQPIPQTLPPAVPH
AVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMA
PPIVPMIHPQVAIAASPAALAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEK
EKVEEKMKDSIKEPVEDPLPMETEEEEPKIEPIKELIKEEPKEEEMTEEEKAAQKAKPVA
TTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMDEGK
KLMKDEHEMLEEANDDEPIKTKKRKKEDNKDMDSEKEAAMEAEIKAARERAIVPLEARMK
QFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNK
IMQAKEDFKKMMEEAKINPRTTFSEFAFKHAKDSRFKAIEKMKDREALFNEFITTARKKE
KEDSKTRGEKIKMEFFELLSNHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYI
EKIAKNVDSEKEKEMERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFK
ALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKKEHFRQL
LDETSSITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLK
ETKFITYRSKKLIQESDQHLKDIEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPP
PPPTASEPTRRTTK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctatgccaccccctcctggtatgatgtttcctccagggatgccacctgtg
tctgctcctggaacaccaactatgccacctaatgacgagatatgggtagaaaataaaact
ccagatggaaaggtttattattataatgcacggacacgtgagtcagcgtggactaaacct
gatggagtgaaagttattcaacagtctgaattaaccccaattttagctgctcaagctcag
gcacaagcacaggcacaggcacaggctgtaggtgcctcaacaccaactactagtagtcct
gcatcagcaatatctacatctacatcatcgagtagcttgtcttcgactacatctaccact
acaacagcaacttcggtttcacaaacagtttccacacctacaacacaagaccagaccccc
agctcagctgtttcagttgccacaccttcagtcagtgtttcaacctctgctccttctgct
acacctgtgcagactgtaccccagccaatcccacagacgctgcctcctgcagttcctcat
gctgttcctcagccaacagcagcaatacctgcttttccaccagtaatggtacctccattt
cgtgttccccttcctggcatgcctattccacttccaggtgtagcaatgatgcaaatagtc
agctgcccgtatgtaaagacagtcgctaccaccaagaccggtgtcttgccaggaatggct
cctcctattgtacctatgatccatcctcaggttgctattgccgcttcacctgctgcattg
gctggagcaacagcagtctctgaatggacagagtacaaaacagcagatgggaagacatac
tactataataataggaccttagaatcaacatgggagaagcctcaagaactgaaagagaaa
gaaaaagtagaagaaaaaatgaaggatagcattaaagaacctgttgaagatcctttgcct
atggaaacagaagaagaagaacccaaaattgaacccatcaaggaacttataaaggaggag
cccaaagaagaagaaatgactgaagaagagaaagctgctcagaaagcaaaacctgttgct
actacacctatacctggtactccctggtgtgtggtatggacaggtgatgaacgggttttc
ttttataaccctaccactagactatcaatgtgggatcgaccagatgatttaataggaaga
gcagatgtggataaaattattcaggaacctccccataaaaaaggaatggatgaaggaaaa
aaactaatgaaagatgagcatgaaatgttagaagaagccaatgatgatgaacctattaaa
acaaagaagcggaagaaagaagataacaaagacatggattcggaaaaagaggctgccatg
gaggcagaaattaaagctgctagagaaagagccatcgtccctctcgaagctcgaatgaaa
cagttcaaagatatgctcttggaaagaggggtttctgctttttctacatgggaaaaagag
ctacacaaaattgtttttgatccccggtacctccttcttaaccccaaggaaaggaaacag
gtatttgatcagtatgtaaaaaccagggcagaagaagaacgcaaagaaaagaaaaataaa
attatgcaggccaaagaagatttcaagaaaatgatggaagaagcaaagattaatcctaga
actacttttagtgaatttgcattcaagcatgctaaagattcacgtttcaaagcaattgaa
aaaatgaaagaccgagaggccttgtttaatgaatttatcacaacagcaagaaagaaggaa
aaagaagattcgaagaccagaggagagaagattaaaatggagttctttgaactgctatct
aatcatcacttggacagtcagtctcgctggagtaaagtgaaggacaaagtagagactgac
cctcgctacaaagccgtggatagttcttcgcaaagagaggatctttttaaacaatatatt
gaaaaaatagccaaaaatgtagactctgaaaaagaaaaggaaatggaaagacaagcacga
attgaggcaagcttgcgtgaacgagagagagaagttcaaaaagctcgttcagagcagaca
aaagagattgatagagaacgagaacagcataaacgagaagaggctatccagaatttcaaa
gcactcttatctgatatggtacgatcttcagatgtgtcatggtctgatacaaggcgaaca
cttcgaaaagatcatcgttgggaatctggctcccttttggaaagagaagagaaggaaaaa
ctttttaatgaacacattgaggcacttacaaagaagaaaaaagaacatttccggcaactt
ctagatgaaacttcatcaattaccttaacgtcaacgtggaaagaagtaaagaagataatt
aaagaagatccgaggtgcattaaattctcttccagtgacagaaaaaagcaaagggagttt
gaagaatatatcagagacaaatatattacagccaaagctgatttcagaacacttttgaaa
gagaccaaatttataacatacagatccaaaaaattaatccaggaatctgaccaacacctg
aaagatatagaaaagatattacagaatgacaaacgttatctggtactagactgtgtgcca
gaggaaaggcgaaaactcatcgtatcctatgttgatgatttagatcgcagaggtccccct
ccaccacctacagcttcagaacctacaaggcgaacaacaaaataa
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