Thamnophis sirtalis (common garter snake): 106554094
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Entry
106554094 CDS
T06107
Symbol
EDA
Name
(RefSeq) ectodysplasin-A
KO
K05480
ectodysplasin-A
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106554094 (EDA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106554094 (EDA)
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Tumor necrosis fators
106554094 (EDA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
106554094
NCBI-ProteinID:
XP_013928166
UniProt:
A0A6I9YVX9
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MGSERGAPLRLPRDRRPLETEGAGWGCACGRRGSGAWRAVAGFFALSLALHLLTLGCYLE
LRSELRRERTAPQDGRQPGGTAEASPDLAPAGRQQLQQQPRVPGEPGRGSPQQMAWLNVF
SPEERPLFREESSRVRRNKRSKNSEGSESTSPKKKKGKKAGPPGPVGPQGPPGPPGPQGP
PGIPGIPGIPGTTVMGPPGPPGPPGPQGPPGLQGPTGTAERAGPRDSQPAVVHLQGQGSA
IQVKNDLSGGVLNDWSRITMNPKVFKLHTRSGELEVLADGTYFVYSQVEVYYINFTDFAS
FEVVVDEKPFLQCTRSIETGKTNFNTCYTAGVCLLRARQKIAVKMVHADISINMSKHTTF
FGAIRLGDGPSS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggagcgcggggcgccgctgcggcttcctcgggacaggcggccgctggagacg
gagggggcgggctggggctgcgcttgcggccggcggggctcgggcgcgtggcgggcggtg
gccggctttttcgcgctctcgttggcgctgcacctcttgacgctcggctgctacctggag
ttgcgctccgagctgcgccgcgagcggacggcgccccaggacggccggcagcccggaggc
actgcggaagcctcgccggacctcgcgcccgccggacggcagcagctgcagcaacagccc
cgcgtccctggcgagcccggcagaggcagcccacagcagatggcctggctgaacgtcttc
tcccccgaggagaggcctctctttagagaagaaagtagccgtgtgcgcagaaacaaaaga
agcaagaacagcgaaggatcagaaagcacaagtcctaaaaagaagaaaggcaaaaaggct
ggccctccaggacctgttgggccccaagggccccctggaccacctggaccccaagggccc
cctggaatcccaggtatccctggcattccaggtaccacggtgatgggacctccaggacct
ccaggacctccaggcccccagggaccccccggcctgcaaggtcctaccggcacagcagaa
agagccggaccgagggattcacagccagccgtagtccacctccaaggccagggctctgct
atccaagtcaagaatgatctttcaggtggagttcttaatgactggtctcgcataaccatg
aacccgaaggtctttaagctgcacacccggagtggcgagctggaggtactggcagacggc
acgtacttcgtctatagtcaggtagaagtgtattacataaacttcacagattttgccagc
ttcgaggtggtggtggatgaaaagccttttctgcaatgcactcggagtattgagacagga
aagaccaacttcaacacctgctacacagctggggtttgtctcctcagagctcggcagaag
attgctgtgaaaatggtccacgctgacatctccatcaacatgagcaagcacaccaccttc
tttggggccattcggctgggggacgggccctcttcctaa
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