Thamnophis sirtalis (common garter snake): 106554416
Help
Entry
106554416 CDS
T06107
Symbol
RERE
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106554416 (RERE)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106554416 (RERE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
GATA
ELM2
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
106554416
NCBI-ProteinID:
XP_013928546
UniProt:
A0A6I9YX63
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSGDGDAVTRHEELVWMPGV
NDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESNYDAGKALQR
LVRKPVPKLIEKCWTEDEVKRFIKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTP
EAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQEL
KGYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEE
DEGLSGKHSMRTRRSRGSMSTLRSGRKKQPTSPDGRASPINEDIRSSGRNSPSAASTSSN
DSKADSVKKSTKKIKEEASSPLKSSKRQREKAASDSEEPDRINAKKTKTQEISRPNSPSE
GEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSISSPQDNESDSDSSAQQQPSLQAANGPA
QPPGPLPAQLPSLPAGSSIPSSAVVPHMSPSGAQPSSQPLAPSLPHSHIQQGPSLHPPRL
PSPPHPPLQPLAGASGQPQGLPPPHPQPSLHGQIQALPHSLQAQPLLPHPAPLQPFALPP
QALPASSSQSQGPLPPPAHPALQNAQDPAAFFLRQLFLSFSSCPSVRPCRFYKHLDRGYN
SCARTDLYFMPLAGSKLAKKREEAIERAKREAEQKAREEREREKEKEKEREREREREREA
ERVAKASSSSHDSRLGESQLSGPAHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP
HVMSPTNRNHPFFVPLNPGDPLLAYHMPGLYNVDPTLRERELRERELREREIRERELRER
MKPGFEVKPPELDALHPATNPMEHFARHGALTLPPTAGPHPFASFHPGLNPLERERLALA
GPQLRPEMSYPDRLAAERIHAERMASLTNDPLARLQMFNVTPHHHQHSHIHSHLHLHQQD
PLHQGSAGPVHPLVDPLAAGPHLARFPYPPGTIPNPLLGQPSHEHEMLRHPVFGAHYPRD
LPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHIHGGHLPSQEDYYSRLKKEG
DKQL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtttttctatatcctgggctacaatccagagacaaggaggctgaacagcacc
caaggagaaatccgggttgggcccagccatcaggccaagctccccgagctgcagcccttc
ccttccggagatggggacgcggtgacgcgtcacgaagagctggtctggatgcccggagtg
aacgattgtgatctactcatgtacctgcgggcagccaggagcatggcagctttcgcaggg
atgtgcgacggcggctcgacggaagacggctgcgtggcggcttcccgggatgacaccact
ctcaacgccctcaacacactacacgagagcaactacgatgccgggaaggccctccagcgt
ctggtgaggaagcccgtccccaaactgatcgagaaatgctggacggaagacgaagtgaag
cgtttcattaaaggcctccggcagtacggcaagaactttttcaggatccgaaaagaactg
ctgcccaataaggagacgggagagctgatcaccttctattactattggaagaaaacccca
gaagctgccagttcccgggctcaccgcaggcatcggcgacaggccgtctttcgaagaatt
aagacccggacagcttccactccggttaacaccccctccaggcccccttccagcgaattc
ttggacttgagttcggccagcgaagatgatttcgacagcgaggacagcgaacaggagctg
aagggctatgcgtgtcgtcactgcttcaccaccacctccaaggactggcaccacggtggg
cgggaaaacatccttctctgcacggactgtcggatccacttcaagaagtacggcgagctc
ccacccatcgagaagccggtggatcccccgccctttatgttcaagccggtcaaagaggaa
gatgagggtctcagtgggaagcatagcatgaggacgagaaggagccgtggctcgatgtct
acgctccgcagtggccgtaaaaagcaacccaccagcccagacgggagggcctcgcccatc
aacgaggacatccgatccagcggccgcaactctcccagcgcggccagcacgtctagtaat
gacagcaaggcggattcagtcaagaaatccaccaaaaagattaaagaagaggcttcttct
cctctcaagagctccaagaggcagcgagaaaaggcggcatccgacagcgaggagcccgac
cgcatcaatgccaagaaaaccaaaacccaggagatcagccgaccgaactctccctcagag
ggcgaaggggagagctccgacagccgcagcgtgaacgacgagggcagcagcgaccccaaa
gacatcgaccaggacaaccgcagcacctcgcccagcatctccagcccgcaggataatgag
agcgactcggattcctcggcccagcagcagccgtctctccaggccgccaacggcccggct
cagcctccggggcccctcccagcacagctgccctccttgccagccggctccagcatcccc
tcttccgccgtcgtcccgcacatgtccccttcaggagcgcagccctccagccagcctctg
gcccccagcctccctcattcgcacatccagcagggcccttcgttgcatccgcccaggctg
ccttcccctcctcacccgccgctgcagccactcgccggggcctccggccagccccagggc
ctccccccgccgcaccctcagccgtccctccatggccagatacaggccctcccgcacagc
ctgcaagctcagcccctcttgccccacccggcccccctgcagcccttcgccctcccgccc
caggccttgccagcctcctcttcacagtctcagggtcccctgcctcccccggcccaccct
gccctgcagaatgcccaggatcccgctgctttttttctgcgccaattgtttttaagtttc
tcgtcctgcccttctgtccgtccttgcaggttctacaagcacctggaccgcggctacaat
tcctgcgccaggacggacctgtacttcatgccgctggccggctccaagctggcaaagaag
cgagaagaggcaatcgagagagccaagcgggaagcagagcagaaagcgagagaagagagg
gaacgggaaaaagagaaggagaaggagagggaacgagaacgggagcgcgagagggaggcc
gagagggtggcgaaagcgtccagttcctcccacgacagtcgtctcggagaatctcagctg
agcggcccagcacacatgaggccgtctttcgaaccgccccccactaccatcgcagctgtg
cccccttacatcggtccggacaccccggccctacggacgctgagcgagtatgcgcgtccc
cacgtcatgtcccccaccaaccggaaccaccctttcttcgttcccctcaatcccggcgac
ccgctcttggcctaccacatgccgggcctctacaacgtggaccccaccctccgggagcgg
gagctgcgggaacgggagctgcgggaacgggagatcagggagcgggaactgcgggaaagg
atgaagccgggtttcgaggtgaagcctcccgaactggacgcccttcacccggccaccaac
cccatggagcactttgcccgtcacggggccctcaccctccccccgaccgcaggccctcac
cccttcgcttctttccaccctgggcttaaccctctggagagggagagactcgctttagcc
ggcccgcagttacggcccgaaatgagctacccggacagactggctgccgagaggatccac
gctgagcgaatggcgtccctcaccaacgatcccttggcccggctccagatgttcaacgtg
acgccccaccaccaccaacattcccacatccattcacatctgcatctccaccaacaggac
ccactacatcaaggctcagccggacccgttcacccccttgtggaccctttagccgctgga
ccgcacttggcacgcttcccttaccctcccggaaccatccccaacccgttgctaggacag
ccgtctcacgagcatgaaatgctgcggcatcccgtcttcggtgcccactacccacgggat
ctccctggcgccatccctcctcccatgtcagcggcccatcagttacaagctatgcacgcc
cagtcggcagagcttcaacgactcgccatggaacagcaatggcttcacggtcacccccac
atccacggggggcatcttcccagccaggaagactattacagccgcctgaagaaagagggc
gacaagcagttgtaa
DBGET
integrated database retrieval system
