Thamnophis sirtalis (common garter snake): 106554440
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Entry
106554440 CDS
T06107
Symbol
PRDM16
Name
(RefSeq) PR domain zinc finger protein 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00310
Lysine degradation
tsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106554440 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106554440 (PRDM16)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106554440 (PRDM16)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
106554440 (PRDM16)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106554440 (PRDM16)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106554440 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_6
Zap1_zf1
zf-BED
zf-H2C2_5
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
106554440
NCBI-ProteinID:
XP_013928576
UniProt:
A0A6I9YX96
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MYMKEGTLPAGNLPPSLEDVPTFRCEDCDELFQSKMEMRRHKKYSCHAVGSLYESLSEEI
KQEGMEDDQGHECKDCERMFPNKYSLEQHMIIHTEEREYKCDQCPKAFNWKSNLIRHQMS
HDSGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHST
VKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNH
YNPGGLFAPGLPLTPSSLMDKSKTSPSLNHSGLGFGDYFPARPHPGAIPFSPAPPSFPAL
APGFPGIFPPSLYPRPPLLPPAPLLKSPINHTQEAKLPSPLGHSPLPLMSAIGNSGHPLH
VEERFNSAPLGNSYLEKLKARTSDLSDASDFEDINTTTGTDLETTTGTGSDLESDAESER
EKTKEKSKPGESKADFGSGSAPTGSANSTSDLPIFYSQHSFFPPPEDQLLPMMGATNDSI
KAIASIAEKYFGPGFMGMQEKKMGALPYHSMFPFQFLPNFSHSVYPFTERTLNHSLLVKA
EPKSPRDLHKIGGACSESPFDLTTKPKESKAAHVLPARHGGEEQPLDLTISSRIRASHHG
SRDARKNHVYGERKLAASDGVPKMNQAQMLPQPSLHYAKPSPFFMDPIYSRVEKRKVADS
VGAIKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKTDAGGASLPPLPHHPFNFRSPPP
TLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRRVSQHAGVIANHLGNNA
SSPASESEHQALLDEKEDAYFSEIRNFIANSEMNQSTALAEKRPEIQNADGATHGLPNDK
VEDVDEEEDELEEEDDDSLTGKSQDETVSPTAEPQGGYEDEEEEEAASLTMSFNRAQRCT
EENEVGLLDLEQMSEFGKGLDFRQASEEAFDVKAVYNSTLDSEALKQTLFRQAKNQAYAM
MLTLTKNTPFHPSSQNPLDAWLNMAGAASEPGTFNAVSHL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgaaagaaggaacgttgcctgctggaaacctgccgcctagtttggaagacgtt
cccacgttccgttgcgaggactgtgacgagctcttccagtccaaaatggagatgaggcgg
cacaagaagtactcctgtcacgccgtcggctctctgtacgagtccctgagcgaggagatc
aagcaggaagggatggaggacgaccaaggccacgagtgcaaggactgtgaaaggatgttt
ccaaacaagtacagcttggagcagcacatgatcatccacacggaagaaagggaatacaag
tgtgaccagtgtcccaaggccttcaactggaaatccaacttgatccgtcaccagatgtcg
cacgacagtggcaagagattcgagtgcgaaaactgcgtgaaggttttcacggaccccagc
aacctccaaaggcacattcgctcccagcacgtcggcgcgagggcgcacgcatgtccggac
tgcgggaaaaccttcgccacttcttctggcctcaaacagcacaaacacatccacagcact
gtgaagcctttcatatgcgaggtctgccacaaatcctacacgcagttctccaacctctgc
agacacaagcgcatgcacgccgactgccggacccagatcaagtgcaaggactgcggtcag
atgttcagcaccacctcctcgctcaacaaacaccggcggttctgcgaaggcaagaaccac
tataaccccggaggccttttcgcaccaggtttgcctctgacgcccagttctttgatggac
aagtctaagacgtcgcccagcctcaatcatagcggactcggcttcggcgactacttcccc
gcccggccgcacccgggagcaattccgttctcgcccgctcccccttcattcccagctctc
gcccctgggttcccggggatcttccctccctcactgtaccccaggcctcctctcttgccc
cccgcgcccctgctcaagagccccatcaaccacacccaagaggccaagctccccagccct
ctgggccactctccgctcccgctgatgtccgccatcggcaacagcggccacccgctccac
gtggaggagaggttcaacagcgcccctttggggaactcctacttggagaagctcaaagct
aggactagcgacctgtcggacgccagcgacttcgaggacatcaacaccacgacgggcacc
gacctggagaccaccaccggcaccgggtcggacttagagagcgatgcggagagcgagcga
gagaaaacgaaggagaaaagtaaacccggggagagcaaggcggatttcggcagcggttcg
gcccccaccggttctgccaacagcacgagcgacctccccatcttctactcccagcactcc
ttcttccctccccccgaggatcagctgctgccgatgatgggggccacgaacgattccatc
aaggccatcgcttccattgccgaaaagtacttcgggcccgggtttatgggtatgcaggag
aaaaaaatgggggcccttccctatcattccatgttcccgttccagttccttcccaacttc
tcccactcggtttacccgttcacggagcggaccctcaaccacagtttgctggtcaaagcc
gaaccaaagtcgccccgggacctgcacaaaatcggtggggcctgctcggagtcgcccttc
gacctcaccaccaagccgaaagaaagcaaagcggcccacgtcctccctgctcgtcacggc
ggtgaggagcagcccctggatctcacgatcagcagccgcatccgggccagtcatcacggg
agtcgggatgcccggaagaaccacgtctacggcgagaggaagctggcggccagcgacggc
gtccccaagatgaaccaagctcagatgctccctcagccttccctgcattacgccaagccc
tcccctttcttcatggaccctatctacagcagggtggagaagcggaaagtggctgactca
gtcggagcaataaaggagaaatacctgaggccctccccgttgcttttccatcctcagatg
tccgccatagaaaccatgacggagaaactggaaagtttcgctgccatgaagacagacgcc
gggggggcttccttgccacccctccctcaccacccattcaacttccggtcgccccctccc
accttatcggatcccattttgcgcaagggcaaagaacgctacacttgcagatactgtggt
aaaatcttcccgcgttcagccaatctaaccagacatctccgaacacacacaggggaacag
ccttaccggagagtaagccagcatgccggagtcattgcaaaccacttggggaacaacgca
tcttcgcccgcctccgaatcggaacaccaagcacttttagacgagaaagaagacgcctat
ttctctgaaatcagaaactttattgccaatagcgagatgaaccagtcgacggctttagcg
gagaaaaggcccgaaatccagaacgccgacggcgccacccacggtcttccgaacgacaaa
gtagaagatgtcgacgaggaagaagatgaactggaagaggaggacgacgacagcctgacg
gggaagtctcaagacgagacggtgtcgcccaccgccgagccacaaggagggtatgaggat
gaggaggaagaggaggccgcgtccctcaccatgagctttaaccgtgcccagaggtgtact
gaggagaacgaagtcggcttgttagatttggaacagatgtcggaatttgggaaggggctg
gacttccgccaggcctccgaggaagcttttgacgttaaagctgtctataattccacctta
gattcggaggcactaaaacaaactctgttcaggcaggccaaaaaccaggcttacgcaatg
atgttgactcttaccaagaacacccccttccatccttcctcccagaaccccctggacgcc
tggttgaacatggctggagccgcttctgagccaggaaccttcaacgccgtcagccacctc
tga
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