Thamnophis sirtalis (common garter snake): 106554513
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Entry
106554513 CDS
T06107
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
106554513
NCBI-ProteinID:
XP_013928681
UniProt:
A0A6I9YXK7
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Position
Unknown
AA seq
563 aa
AA seq
DB search
MLGKERISKKQKELPLASLRGEQGPPGEPGPRGPPGSPGLPGHGVPGAKGKPGPQGYPGI
GKPGMPGMPGKPGAMGPPGSRGKPGMIGFPGPQGAIGKPGIPGERGPKGLAGSPGIQGPP
GLPGIGKPGQDGIPGQSGMPGGKGEQGLPGLPGSPGAPGIGKPGFPGPKGDRGMGGAPGP
LGPKGEKGYVGPPGMAGPPGEPGQPGQPGLMGPSGVMGFPGPKGEFGAVGPPGPIGPKGE
LGLQGFPGKPGFPGEVGPSGLRGLPGPIGPKGEAGHKGLPGLPGAHGLMGPKGEPGKPGT
QGHQGPTGIPGIAGPSGPIGPPGLPGTKGERGLPGPPGFPGMGKPGVSGIPGPPGKPGSL
GAPGQPGLQGPPGPPGPPGPPIIMQPTPPAMGHYLPEIGPGLDGIKTPYGYKGKKSKNSA
AAAAAAAATTTYEMPAFTAELTTPFPRVRVPVIFDKLLYNGRQNYNPQTGVFTCEIPGIY
YFAYHIHCKGGNVWVALFKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDRVYIQMPSE
QAAGLYAGQYVHSSFSGYLLYPM
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcaaggagaggatttcaaagaaacagaaagaattgccattagccagcttgaga
ggtgagcagggtcctcctggagagcctggaccaagagggcctccaggatctccggggctg
ccaggacacggagtaccaggagctaaaggaaaaccaggaccgcaaggatacccaggaatt
ggaaaaccaggcatgcctggaatgccaggaaaaccaggagcaatggggcctcccggatca
agaggcaaaccaggaatgataggttttccaggccctcagggagctataggcaaaccagga
attccaggggaaagagggccaaagggcttagctgggagtcctggaattcaaggtcctcct
ggtcttccaggtatagggaagccaggacaagatggaatcccaggacagtcaggcatgcca
ggtgggaaaggggaacaaggcctgccaggtttaccagggtcacctggtgctcccgggatt
ggaaagccaggtttccctggtcctaaaggtgatcggggcatgggtggtgctccgggccca
ttgggacctaagggtgaaaaaggttatgtgggcccacctggcatggctgggcctccaggg
gaaccaggccaaccaggccagcctgggttaatggggccctcaggtgttatgggattccca
ggtccaaaaggagaatttggagctgttgggcctccaggacctattggtcccaaaggtgag
cttggtttgcaaggtttcccaggtaaacctggttttccaggagaggtgggcccatcaggt
ctgagaggcttgcctggtccaattggaccaaaaggagaagctggtcacaaaggtttgcca
ggtttgcctggtgctcatggactgatgggccccaagggagaacctggaaagccaggaact
caaggccatcagggccctactggaatcccaggtattgcaggaccaagtggccccattgga
cctcctggactacctggaactaaaggtgaacggggtttgccaggcccgccaggttttcca
ggaatggggaaacctggtgtttcagggatacctggaccaccagggaaacctggatcgctt
ggtgctcctggccagccaggtctccaaggacctcctggtccccctggcccccctggccct
ccaataataatgcaacctacaccgccagcaatgggacactatttgccagagatagggcca
ggccttgatggaataaagactccatatggttataaggggaagaaaagcaaaaacagtgct
gccgccgccgctgccgccgctgccactaccacctatgaaatgccggctttcacggctgag
ctcaccactcctttcccacgggtcagggttcctgtgatctttgacaagctcctttataat
ggcaggcagaattataatccacagactggtgtctttacctgtgaaatccctgggatctat
tacttcgcttaccacatacactgcaaagggggaaatgtctgggtggcattatttaaaaac
aatgagccattgatgtacacgtatgatgaatacaagaaaggtttcctggaccaagcttct
ggaagtgccgttgttcagctgatgcacggtgacagagtttatatccagatgccctctgaa
caggcggcgggactttatgctgggcaatacgttcactcatctttttctggatatttattg
tatccaatgtaa
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