Thamnophis sirtalis (common garter snake): 106556314
Help
Entry
106556314 CDS
T06107
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C4
Collagen
Motif
Other DBs
NCBI-GeneID:
106556314
NCBI-ProteinID:
XP_013930783
UniProt:
A0A6I9Z1A5
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MGLPGPPGTKGSQGVPGRFGQPGSPGSPGLKGDKGDPGTSGTGIPGPPGPKGESGLPGYP
GSPGPKGSLGNPGLSGLPGSLGAKGEPGLPGFPGTPGISGPKGLDGPPGNPGVPGPPGPP
GEFGRPGSPGLLGEKGKPGQDGIPGPSGQKGEPGQPGFGLPGPPGLPGLAGQKGDSGYFG
PPGPPGSPGLKGEMGPKGFPGLQGLEGPPGLPGPPSEGPKGSPGLPGIPGRPGATGHPGL
PGPEGPPGPPGIGGVKGEKGNPGQIGQPGLPGLKGDQGAPGQPGEPGRPGLNGMKGDSGV
PGVPGFPGLKGPTGPLGPSGPGGDPGPFGSPGPPGIPGTPGQTVVVKGDQGPPGPSGQPG
MKGLSGLPGPPGLPGSFGFPGDAGRDGPPGSDGPAGRKGERGLPGQPGLRGSQGPPGPDG
LQGPPGLPGPGSVAHGFLITRHSQTTDAPFCPPGTSQIYDGFSLLYVQGNERAHGQDLGT
AGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGRNIQPFISRCT
VCEAPAMVIAVHSQTIQIPSCPQGWYSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFR
SAPFIECHGRGTCNYYANSYSFWLATVEIAEMFNKPQSETLKAGDLRARISRCQVCMKRT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggggctgccaggtccccctggcacgaaaggttcacaaggggtcccagggcgttttggc
cagcctggttctcctggatcacctggactgaagggagacaagggggatcctggtacatca
ggcactggcattccgggtcctcctggccccaagggtgaaagtggactgcctggctaccct
ggttctccaggccctaaaggatctcttggaaatccagggttgtctggcttgccaggttct
ttgggagcaaaaggtgaacctggccttcctggattcccagggacaccaggcatttcagga
ccaaaaggtcttgatggacctccaggaaacccaggtgttccagggccacctggacctcca
ggtgaatttggtcgccctggctctccaggcctcctgggggaaaaaggaaaacctgggcaa
gatggcatccctggaccatcagggcagaaaggagaaccaggtcaaccaggatttggactt
cccggacctccaggcctcccaggactcgcaggtcaaaagggagattcaggctactttgga
cccccggggcctccaggatcccctggtttaaaaggagaaatgggtcccaagggatttcct
ggccttcagggtttagaaggtcctccaggacttcctgggccaccatcagaaggacctaag
ggtagccctgggctaccaggcataccaggacggccaggtgccacaggtcatccaggtctt
cctgggcctgaaggaccccctggaccacccgggattgggggagtgaaaggagaaaaagga
aaccctggacagataggtcagcctggactgcccggactgaagggagatcaaggggcacct
ggacagccgggtgaacctggacgcccaggcctgaatgggatgaagggagactcaggtgtt
cctggagtaccaggatttccaggtttgaagggacctactggacctttgggaccttctggc
cctggaggagaccctggaccctttggctccccaggtcctccaggtatacctggtacacct
ggacaaacagttgtggttaaaggtgatcaagggccacctggtccttcagggcagcctgga
atgaagggtctatctggacttccagggcctccaggtttgccaggttcatttggttttcct
ggtgatgctggacgtgatggtccccctggttctgatggtccagcaggacgtaaaggggag
agaggactcccaggccagccaggtctgcgtggttcacaggggcctcctggccctgatgga
ttgcaaggtcctccaggactcccaggaccaggttcagtcgcccatggattcctgatcact
cgtcacagccaaaccaccgatgcccccttctgcccaccaggaaccagccagatctatgat
ggattttcccttctctatgtgcaaggaaatgagagagctcatgggcaggatctgggcact
gctggcagctgtctccgccgtttcagcaccatgcccttcatgttttgcaacatcaacaac
gtgtgtaactttgcatctaggaatgactactcttattggctttccactcctgagccgatg
ccaatgagcatggagccactaactggaaggaatatccaaccttttattagccgttgcaca
gtctgtgaagctcctgcgatggtcatagcagtccacagccagaccattcaaatcccctcg
tgcccacaaggctggtactcactctggatcggatattcattcatgatgcacaccagtgct
ggggcagaaggatccggacaggccttggcttctcctggctcttgtcttgaggaattccgc
tcagctcccttcattgagtgccacggccgagggacctgcaactattatgccaattcatac
agtttttggctggcaactgtggaaatagcagaaatgtttaataaacctcagtcggagact
cttaaggctggcgaccttcgggcccgtatcagccgatgccaagtttgcatgaagaggacg
taa
DBGET
integrated database retrieval system
