Telopea speciosissima (New South Wales waratah): 122652557
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Entry
122652557 CDS
T07910
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
tss
Telopea speciosissima (New South Wales waratah)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
Lactamase_B_2
RMMBL
Med14
Motif
Other DBs
NCBI-GeneID:
122652557
NCBI-ProteinID:
XP_043702271
LinkDB
All DBs
Position
2:complement(55263446..55336369)
Genome browser
AA seq
1444 aa
AA seq
DB search
MKNPDSMATKTLALNSSNLFLDSYRAFSQHSPQTSHPSSFTLLSQGSSLPPVPADFPQSK
IIPRTRFIVDGFRHSGDYSVSYFLSHFHSDHYTGLNSSWSRGVIFCSETTARLLVESLKV
SNSFVVSLSLGETVLIDGCTVTLIDANHCPGAVQFLFRIPGLQGKDERYVHTGDFRFSNS
MKQEPLLSGYTGADAIFLDTTYCNPKFVFPSQDDSVDYIVRAIERIRLENKGLVKSVLFL
IATYVLGKERILVEIARRCNCVIHVDSRKMAVLCVLGFGESGIFTEDDSATDVHVVGWNI
LGETWPYFRPNFAKIKEIMTEKGYLKAVGFVPTGWMYEAKRDGFAVRTKDSFEIHLVPYS
EHSSYDELREYARFLRPKCVIPTVGSEIEKLDSKHVIEMRKHFAGLVDETANKQDFLMSF
HWRSRTRDEGGEIGISINSERGLDKDDEVKSTGKPLEGLDNTDSRFGLDSSSSLQEPSSR
DLNVASDKDTEEMIQELRDCLPVWITRDQMLALLGGSGGNIVDAVSEFYERETEFREQVI
AFSGSAATQASSTSIPEIESNGVTALGSKKSTLSSASNSEVFSELESNKGTPCGNKASTL
VQEKKSPHMKHSIKNTISPKKRAMGSLNKSNKKPNKKAKGGSTMESSSSRSKQTTITKFF
NKLGTDASQVARICSAAAEQCPTSTNLLPIDAIESYKEEVDQFLQLVNGSVSRSNATSFL
EKAKGDVNLALDIYYCGSSGDLRAGTHSVQTQHCVSTPSAGKEAESSEETKNTPSLFMQG
LSTGDSTASFVSLPLEKYSPVEHACWNSGQSAPYLHLARTFNLVEGERGKIKAIGILCNM
FRSLLALSPEDVLPAIYLCTNKIAADYENMELNIGGSLVTAALEEACGTNRSKIKEMYNK
MGDLGDVAQVCRQTQSFLAPPCPLSIRDVFSSLQKISAEIGSGSTTRKKMLIVNLMHSCR
EKEIKFLVRTLVRNLRIGAMMRSVLPALAQAVVMNSNDVLHEGALETLKPKLQSISAAVV
EAYNILPNLDLLVPSLMNKGADFSSTTLSMVPGIPIRPMLARITNGVPQVLKMFQGRAFT
YVYLPPCRYDGQRAQIHRLTDGSVRVFSRNGDETTSRFPDLVNIIKESCKPDAVTFILDA
EVVAVDRRNGCKLMSFQELSSRERGSKDSLIMVDSIKVEVSVFVFDIMFANGEQLLGVSL
RQRRRYLKDLFHDQKLGYFEYAMEIIVEEEDACVSSQTTLTRINSFLEDAISSSCEGIMV
KCLDVEAGYAASKRTDTWLKVKRDYVEGLNDSIDLVPIGAWHGNGRKAGWYSPFLMACYN
PETEEFQSVCRVMSGFSDSFYVEMKEFFSDDKILSKKPPYYQTAEVPDIWFSPELVWEIR
GADFTISPVHQAAIGLVHPSRGISIRFPRFIRSVLDRRVDECSTAEDIADMFRSQTRKMD
VEVA
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccctgattctatggcgaccaaaaccctagccctgaattcttccaacctcttc
ctcgattcttacagagctttctcacagcattctcctcaaacctcccatccttcgtccttc
accctgctctcacaaggatcttctctccctcccgttcctgcggatttccctcaatccaag
atcattccaagaacacgcttcatcgtcgatgggttccgtcattccggtgattactctgtt
tcttacttcctctcgcactttcattctgaccattacactggtttaaactccagctggtca
agaggcgtcattttctgctcggaaaccacagctcgacttctcgttgaatctttaaaagtg
tctaattcgtttgtcgtctcgttgtcgctcggtgaaacagttcttatcgacggttgtaca
gtgacactcatcgatgctaatcactgccctggtgcggttcagttcttgttccggataccg
ggactgcagggcaaggacgagaggtatgtacatactggggatttccggttctctaattcg
atgaagcaagaaccattgcttagtggatacactggcgcggatgccattttcttggatact
acatattgcaatcccaaatttgtttttccctcacaagatgattcagtcgactatatagtc
agggcaattgaaagaattagactcgaaaacaagggccttgtgaagtctgtgttgtttctt
attgctacttatgtgcttgggaaagagaggattcttgttgagatcgcacgaagatgtaac
tgcgtgatacatgtggacagtaggaaaatggcagttctgtgcgttttagggttcggtgaa
tctgggatttttacggaggatgattcggctacagacgttcatgtggttggctggaatata
ttgggtgagacttggccttattttcgacctaattttgctaaaattaaggagattatgact
gagaagggttatttgaaggccgttggatttgtccctacaggatggatgtatgaagcaaaa
cgagacggatttgcagttaggaccaaggattcttttgaaattcatttggtgccatacagt
gaacattcaagttatgatgaattgagagagtacgcgaggtttttgagaccaaagtgtgtt
attccaacagtaggttcggaaattgagaaacttgatagcaaacatgttattgaaatgcgg
aagcattttgctggattggttgatgagaccgcaaataaacaagacttcttgatgagtttc
cactggaggtcccggaccagggacgaaggcggtgaaattggcatcagcattaactctgaa
aggggactagacaaagatgatgaggttaagtcaacaggaaagcctttggaaggactcgat
aatactgattcaaggtttggcttggattcatcatcttccctgcaagagcctagttcacgg
gatctgaatgtggcaagtgataaagatacggaggagatgattcaagagcttcgtgattgt
ttgcctgtctggattactcgagatcagatgttagcactgcttggtggctctggtggtaac
attgtagatgcagtttctgagttttatgaacgtgaaacagaattccgtgaacaggtaatt
gcttttagtggctctgctgctactcaggcaagttctacatcaattcctgaaatagaatct
aacggggtcactgctcttggaagtaaaaagagcactctaagctcagcaagtaattctgaa
gtattttctgaacttgaatcaaataagggtaccccttgtggaaataaagcgagcacttta
gttcaagaaaagaagtcaccacacatgaagcattcaattaagaataccatctctccgaag
aaaagggctatgggctctttgaataagtcaaacaaaaagccaaacaaaaaagcaaagggc
ggttcaacaatggaatcttctagctctagatcaaaacaaacaacaattacaaagtttttc
aataaacttgggactgatgcttcgcaagttgctaggatttgtagtgccgcggctgaacaa
tgccccactagcacaaacttgttgccaattgatgctattgaatcatacaaagaagaagta
gatcaatttcttcagctagtaaatggcagtgtgtcaagaagcaatgctacttctttcctg
gagaaggctaaaggagatgttaatttggctctggatatatattactgtggttctagtggt
gaccttcgagctggtactcattcagttcaaactcaacactgtgttagtactccttctgct
gggaaagaagctgaatcatccgaggaaacaaaaaatactccaagcttgttcatgcagggg
ctttcaactggggacagtactgcatcttttgtgtctttacctttggaaaaatattccccc
gttgagcacgcatgctggaatagtggacagtctgcaccatatttacatcttgcacgcact
ttcaatttggttgaaggggaaagaggcaagataaaagctattggtattctgtgcaacatg
ttccgaagtttgcttgccttatcaccagaagatgtgcttcctgccatttatctgtgcaca
aataagattgctgctgactatgaaaatatggaactaaacattggtggcagtttggtgaca
gctgcacttgaagaggcatgtgggactaacagatctaaaataaaggaaatgtacaataaa
atgggtgatctaggtgatgttgcgcaagtatgtcggcagactcaatcgtttcttgctcct
ccttgcccactttcaatcagagatgtattttcttctcttcaaaaaattagtgcagaaata
ggcagtggaagtaccactcgaaagaagatgctcattgtgaatctcatgcattcttgtcgg
gagaaggaaattaagttccttgttcgcactttggttcgtaatttgcgtattggggccatg
atgagaagtgtacttccggcattggcacaagctgtcgtcatgaactccaatgatgttctt
catgaaggtgcactggaaacccttaagccgaagcttcagagcatttctgcagcagtagtt
gaggcctataatattctcccaaatttggatttgcttgttccttctcttatgaacaaaggc
gctgatttttcttcaactactttgtcaatggttcctggcatacctataaggcctatgctt
gccaggattactaatggagttcctcaagtgctgaagatgttccaaggtagagcttttaca
tatgtgtatctccccccctgtaggtatgatggtcagcgtgctcaaattcaccgattaact
gatggatctgtacgagtcttttcacgaaatggtgatgaaacaacatcaagatttccagat
ttggtaaatataataaaggaatcatgtaagccagatgctgtgactttcatattggatgcg
gaggtagttgctgttgataggagaaatggatgcaagcttatgtccttccaagaactatct
tcgcgagagagagggagcaaagattctttgatcatggtggacagcataaaggttgaagtt
agtgttttcgtctttgatatcatgtttgctaatggagagcagttgttgggtgtttcccta
cgtcaaaggcggagatatttgaaggatttatttcatgaccagaagttgggttattttgaa
tatgcaatggagataatagtggaagaagaagatgcatgtgtgtcctctcaaaccactttg
actaggataaactcttttcttgaagatgcaatcagctcatcatgtgaaggaataatggtg
aaatgtctagatgttgaagccgggtatgctgcatcaaagcgtacagatacatggttgaag
gtcaagcgagattatgtggaaggactgaatgattctattgatttagttcctattggagct
tggcatgggaatggaagaaaagcaggatggtatagtccattccttatggcatgttataac
cctgagactgaagagtttcaaagcgtttgtcgcgtcatgtctggattctctgattctttc
tatgtggagatgaaagagtttttctctgatgacaagatcttatccaaaaagccaccttat
tatcaaacggctgaggtgcctgatatatggttttctccagaacttgtttgggaaataaga
ggtgcagacttcacaatttcgccagttcaccaagctgcaattggtttagtccatccatct
cgtggtatctctatcagattcccaaggttcattcgctctgtattggatagaagggtagat
gaatgtagtacagctgaagatatagctgatatgtttcgctcccagactagaaagatggat
gtggaagttgcctga
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integrated database retrieval system
