KEGG   Telopea speciosissima (New South Wales waratah): 122658064
Entry
122658064         CDS       T07910                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122658064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122658064
Spliceosome [BR:tss03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122658064
 Complex B
    122658064
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 122658064
NCBI-ProteinID: XP_043708872
LinkDB
Position
4:14722369..14765066
AA seq 570 aa
MPDYGGRYDGNGDGLNDYSSSPPQKTSSHGGADEYSDSKSRHGSREYDRESSRSREKERE
KSRDKDRERDRGRDRDRDRERDRDRDRDRHHRDHYRERNDRRDRGRDRDDDEDYHRIRDY
ERRREYDRDRDGRHRHRSRSRSRGKSHHRSRSRSCSRSRSRSKSKRVSGFDMAPPTALMP
GAAAAAAAAAAAGQLNGPTPAIPGMFPNMLQFPGQLATPLLMHPQAMTQQATRHARRVYV
GGLSPTANEQSVATFFSQVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM
ALDGIIFEGAPVKVRRPSDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFV
GGLPYYFTEVQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGI
KMGDKTLTVRRANQGASQPKPEQESVLLQAQQQVALQRLVFQGGALPTKVICLTEVVNAD
ELKDDEEYEDIMEDMRAEGGKYGNLANVAIPRPGPNGELSPGVGKVFLEYADVDGATKAR
QGLNGRRFGGNVVTANYYPENKFSQGEYDG
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgccggattacgggggaagatatgacggtaacggcgatggactcaacgattacagttcc
tcacccccacagaagactagcagtcatggcggtgcggatgaatatagtgactctaaatcg
cggcatggatcccgggagtatgacagagaatcttcaagaagtagggagaaggaaagagaa
aaaagccgggataaggacagggaaagggatcgaggcagagacagagacagagacagggaa
agggatcgagacagagatcgggatcgtcaccatagagaccactatagggaacggaatgac
agaagggaccgtggtcgagatagagatgacgatgaggattatcaccgaattcgagactat
gagaggcgtagagaatatgatcgagatcgagatgggcgacatcgacataggtctcgatct
cgttcaaggggtaaatctcatcatagatcaagatctcgctcttgctctcgatctcgttca
agatcaaaaagcaaacgggttagtggtttcgacatggctcctccaactgcattgatgcca
ggagcagcagcagctgctgctgctgctgctgcagcaggtcaattgaatgggccaactcca
gcaatccctggaatgtttccaaatatgttacaatttcctggacagctggcaaccccactc
ttgatgcaccctcaggcaatgactcagcaggcaacaagacatgctcggcgggtttatgtt
ggtggcctttctccaactgcgaatgaacagtcagtggcaactttcttcagccaggttatg
gctgcaattggaggaaactctgctggaccaggagatgctgttgtcaatgtatacatcaac
catgagaagaagtttgcatttgttgaaatgaggtctgttgaggaggctagtaatgctatg
gccttggatggtattatttttgagggtgcaccagtgaaggtgaggcggccaagtgattac
aatccttctcttgctgcagcacttgggccaagtcaaccaaatcccaatctcaacctagct
gctgttggattaactccaggttctgctggtggactcgagggtcctgatcggatcttcgtg
ggtgggcttccgtactatttcacagaagtacagatacgggagcttttagaatcctttggg
cctcttcgtgggtttgatcttgtcaaggacagggaaacagggaactcaaaaggctatgca
ttttgtgtgtatcaagatctgtcagtaactgacatcgcttgtgcagctctcaatggaata
aaaatgggtgataaaactctcactgttaggcgtgcaaatcagggtgcttcacagccaaaa
cctgagcaggagagtgtattattgcaggcacagcagcaggtagctttgcagagacttgtt
ttccaaggtggtgcactacctaccaaggttatatgcttaacagaggtagttaacgcagat
gagctaaaagatgatgaggagtatgaagacataatggaagacatgagagcagaaggcgga
aaatatgggaatctggccaatgtagccattccacgtccgggaccaaatggcgagttatct
ccaggtgttggaaaggtgttcttggagtatgcagacgtagatggagctaccaaagccagg
caagggttgaatgggaggagatttggaggaaatgtagtcacagccaattattatccagag
aacaagttttcccagggcgaatatgatggatag

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