Telopea speciosissima (New South Wales waratah): 122664040
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Entry
122664040 CDS
T07910
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122664040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122664040
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
SR proteins
122664040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
DbpA
Nup35_RRM
DUF2129
Motif
Other DBs
NCBI-GeneID:
122664040
NCBI-ProteinID:
XP_043715654
LinkDB
All DBs
Position
6:complement(60258733..60262166)
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AA seq
273 aa
AA seq
DB search
MKPIFCGNFEYDARQSDLERLFGRYGKVDRVDMKSGFAFVYMDDERDAEDAIRSLDRSEF
GRQGRRLRVEWTKQERGIRRPGSSRRSATANLKPTKTLFVINFDPVRTRTRDLEKHFDPY
GKVLNIRIRRNFAFIQYESQEDASKALDATNMSKLRDRVISVEYAVRDDDDRRNGYSPER
GRDRSPERRSRDRRDHGRSPSPYRRERGSPDYGRGPSPYSKPEPRASPDYGRAESPVYER
YRSRSPAEREKSPREISPAERKRSPQARERSRS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatcttttgtgggaactttgagtatgacgctcgccagtctgatcttgagcga
ctttttggcagatatggaaaggttgacagggtggatatgaagtctggatttgcttttgtc
tatatggatgatgagcgagatgctgaggatgcaatacgatcactcgaccggtcagaattt
ggtaggcaggggcgcaggcttcgtgttgagtggacaaagcaagaacgtggtataagaaga
cctgggagttcaagacgatctgccacagctaatttgaaacccactaagaccttgtttgtt
atcaactttgacccagttcgcactaggacgagagacttggagaagcactttgatccatat
ggaaaagtactgaatataaggattagaaggaattttgctttcattcagtatgaatcacaa
gaagatgcctccaaagcactggatgcaacaaacatgagcaagttgagggatcgagttatt
tctgtggaatatgctgttcgagatgatgatgacaggagaaatgggtacagccctgagaga
ggtcgtgacaggtcacctgagaggaggagccgtgatagacgtgatcatggccgatcgcca
agcccttaccgaagagagagaggtagtcctgattatggccggggacctagcccgtattct
aagcctgaaccacgagcaagtcctgattacggtagagctgaaagccctgtctacgagaga
tatcgcagccgttcacccgcagaacgcgaaaaatctccccgcgaaatatcacctgcggaa
cgcaaaagatctccccaggcacgtgaaagatctcgatcttga
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