Telopea speciosissima (New South Wales waratah): 122664458
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Entry
122664458 CDS
T07910
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122664458
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122664458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
122664458
NCBI-ProteinID:
XP_043716211
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Position
6:complement(57468821..57512001)
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AA seq
792 aa
AA seq
DB search
MEDEGGERSSIVIGLIENRAKEVGVAAFDMRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VIIVPPNKMAPDGMVGVSELVDRFYSSAKKVVMARGCFDDTKGVVLVKSLAAKDPSALGL
DTYYKQYYLCLAASAATIKWTEAEKGVIVTNHSLLVTFNGSFDHMNIDSTSVQNLEIIEP
LHSTLWGTSNKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIGTINARLDCLDELMTNEE
LFFSLSQVLRKFPKESDRVLCHFCFKPNKVTNGVLGVENARKSQVLISNIILLKTALEAL
PLLTTVLKDAKCSLLTNVYESISANEKYAAIRKRISEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDVARRLFCDTSEAIHSLANKYREEFNLPNLKIPFKSRQGFYLSIPQKDINGR
LPSKFIQVLKHGNNLHFSTLELASLNVRNNSVAAECYTRTELCLEALIDSIRGDVSALTL
LAEVLCLLDMIVNSFAYTISTKPVDRYTRPEFTDNGPLAIDAGRHPILETIHNDFIPNSI
FLSEASNMVIVMGPNMSGKSTYLQQVCLLVILGQIGCYVPARFSSLRVVDRIFTRMGTGD
NLESNSSTFMTEMKETAFVMQNVSPRSLIVMDELGRATSSTDGFAIAWSCCEHLLSLKAY
TIFATHMENLSELATIYPNVKILHFDVDVQNKRLEFKFQLKDGPRHVPHYGLLLAGVAGL
PSSVIETARRITSRITEKEMRRMEVNCMQYHPIQMAYRVSQRLICLKYSNQDEDSIRQAL
QNLKENYADGKV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaggtggcgaaaggtcgagcatcgtgatcggcttgattgagaacagagcg
aaggaggttggagttgctgcatttgacatgagatcagcttcactgcatctctctcaatac
attgaaactagcagttcgtatcaaaatacaaagacattgttgcatttctatgatccgatg
gtaatcattgtccctccgaataagatggcgcctgatggtatggttggagtctcagagttg
gtggatagattttattcatcagccaagaaggttgtaatggcccgtggttgctttgatgac
accaagggagttgtactggttaaaagtctggcagccaaggatccatctgcgcttggtcta
gacacttattacaagcaatattatctatgtttggctgcttctgcagctactatcaaatgg
acagaagcagagaaaggggtaattgttacgaaccactcattgttggtcacctttaatggc
tcatttgaccatatgaatatcgactctactagtgtacagaacttggaaatcattgagcca
ctacattcaaccctttggggaacaagcaacaaaaaaagaagtctatttcacatgcttaag
acgacgagaactattggaggtaccagacttctccgtgccaatcttttgcagcctttaaaa
gacattgggactatcaatgcccgtcttgactgcctggatgaattgatgaccaatgaggag
ttattttttagtctctcacaggtccttcgtaagtttccaaaagaaagtgatagggtattg
tgtcatttctgcttcaagccgaataaagtcacaaatggggtcttgggagtagaaaatgct
agaaagagccaggtgttgatttcaaacattatccttctcaagactgctttggaagcactg
cccttgctcaccacggtgcttaaggatgcaaaatgttctcttcttacgaacgtttatgag
tccatttctgcaaatgagaaatatgccgccataaggaaaagaatcagtgaagtgattgat
gaagatgtacttcatgcacgggttccttttgttgctcgtacacaacaatgttttgctgta
aaggctggaattgatggacttctggatgtcgctcggagattgttctgtgatactagtgaa
gccatacatagccttgcaaacaaataccgtgaagagttcaatctaccaaatttgaaaatt
cctttcaaaagtaggcaggggttttacttgagcattccacagaaggatataaatggaaga
cttcccagtaaattcattcaggtcctcaaacacgggaacaacttacatttctcaactctt
gaacttgcttctttgaacgttaggaacaactctgtggctgcagagtgctatacgcgaaca
gaactttgtttggaagcactaattgatagcataagaggggatgtttctgcgctcaccctt
cttgccgaggtcctatgtcttctagacatgattgtaaactcatttgcttatacaatatcc
actaagcctgttgatcgttacactagaccagaatttacagataatggcccattggcaatt
gatgctggcaggcatcctattctggaaaccatacacaatgacttcattcctaacagtatt
ttcctttccgaagcatccaatatggtaatcgtcatgggtccaaacatgagtggaaagagt
acttatcttcaacaagtgtgtcttttagtcatacttggtcagattggttgctatgttcct
gctcgcttctcctctctaagagtggttgatcgaatattcacacgaatgggaacaggggac
aaccttgaatccaactctagtacgtttatgactgagatgaaagagacagcttttgtcatg
cagaatgtctcccccaggagtctgattgttatggatgaacttgggagggctacttcttct
actgatggatttgcaattgcatggagctgttgtgaacacttgttatcactgaaagcttat
acaatatttgcaactcacatggaaaacctgtctgaactagcaacgatttacccaaatgtg
aaaattctccattttgatgttgatgtacaaaacaaacgcctggaattcaagtttcaactc
aaagatgggccacgacatgtgccacactatgggctcctattggctggagttgcaggacta
ccgagctcagtaattgaaacagccagaagaatcacatcaaggataacagaaaaggaaatg
aggaggatggaagtgaactgcatgcaatatcatccaattcaaatggcttatcgtgtttct
cagagactaatatgcttgaaatactccaaccaagacgaggattcaatccgacaagcgctg
cagaatcttaaggagaattatgctgatgggaaggtataa
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