Trachemys scripta elegans (red-eared slider): 117867726
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Entry
117867726 CDS
T07347
Symbol
VTN
Name
(RefSeq) vitronectin
KO
K06251
vitronectin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117867726 (VTN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117867726 (VTN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117867726 (VTN)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117867726 (VTN)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117867726 (VTN)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117867726 (VTN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
117867726
NCBI-ProteinID:
XP_034608858
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Position
18:complement(1108441..1118282)
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AA seq
439 aa
AA seq
DB search
MRLLVPALMLGLLCGAFAAEESCVGRCEDGFHAQRKCQCDALCVYYQSCCSDYAMACKSK
VTRGDMFAFPEDDYMDYSTNATLGETTETLDTATDPPTTSPDPVTAATVDSVTVPGSGVP
LLVPSGPEEVEQEEVEEVEELCSGKPFDAFTDLKNGSLYAFRGKYVYELDEKSVRPGYPK
LIRDVWGIEGPVDAAFTRINCQGKTYIFQGSQYWRFNEGALDPGYPRNISDGFQDIPDDI
DAAFALPAHSYHGQERVYFFKDKHYWAYDFANQPSQQDCEMSSPSLVFDHYALMQGDSWE
DLFQLLFGGTPYTGASGPRYISRDWRGLPRPLDAAMAGRIYVSSKASSWSRRRKSRRHRK
KYRSRRPAAHTFWDWLQDESDSSDTDPDWLPGGSQCQPIQSVYFFVADKYYRLNLRSKRV
DFARPRYPRPIAQYWLGCP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctggtcccagctctgatgctgggtttgctctgcggagcttttgcagctgaa
gagtcgtgtgtgggccgttgcgaggatggtttccatgcccagaggaagtgccagtgtgac
gccctctgtgtgtactaccagagctgctgcagtgactacgcgatggcctgcaagtcgaaa
gtgacccgcggggacatgtttgcattccccgaggacgactacatggactacagcaccaat
gctacgttgggtgaaaccacagagaccctcgacacagcgactgaccccccaaccacatct
ccagacccagtcactgctgccactgttgattcggtcacagtgccaggcagtggggtcccc
ctgctggttcccagtgggccggaagaggtggagcaggaggaggtggaggaggtggaggag
ctgtgcagcggaaagccctttgatgcattcacggacctgaagaacggttctctctatgca
ttccgagggaaatacgtctatgaactggacgagaagagcgtgaggcccggctaccccaag
ctcatccgcgatgtctggggcatcgaggggcccgttgatgccgccttcacacgcattaac
tgtcagggcaagacctacattttccagggcagtcagtactggcgcttcaacgagggtgcc
ctggaccctggctacccccgcaatatctcggatggcttccaggacatccctgatgacatc
gacgcagccttcgccctccccgcgcacagctaccatggccaggagagagtctatttcttt
aaagacaagcattactgggcatacgactttgccaaccagcccagccagcaggactgtgag
atgtcctccccatcgctggtgtttgatcactacgcgctcatgcagggcgacagctgggag
gacctcttccaactgctctttgggggcaccccgtacactggggccagtggaccgcggtac
atcagcagagactggagggggctgccgagacccctagatgctgccatggccggcaggatc
tacgtctcctcaaaggctagcagctggtctcgaaggaggaaatcccgccggcaccgcaag
aagtacaggagccggcggccggcagctcacactttctgggactggctccaggatgaatcc
gattcctcggacacggaccctgactggctgcccgggggctcccagtgccagcccatccag
agcgtctacttcttcgtggcagacaagtactatcgcctcaacctgcgcagcaagcgcgtg
gacttcgcgcgccctcgctaccctcgccccatcgctcagtactggctgggctgcccatga
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integrated database retrieval system
