Trachemys scripta elegans (red-eared slider): 117870870
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Entry
117870870 CDS
T07347
Symbol
RBM26
Name
(RefSeq) RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117870870 (RBM26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117870870 (RBM26)
03041 Spliceosome [BR:
tst03041
]
117870870 (RBM26)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117870870 (RBM26)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117870870 (RBM26)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117870870 (RBM26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
Nup35_RRM
zf-CCCH
zf_CCCH_4
RRM_3
Motif
Other DBs
NCBI-GeneID:
117870870
NCBI-ProteinID:
XP_034614173
LinkDB
All DBs
Position
1:265409433..265511585
Genome browser
AA seq
1012 aa
AA seq
DB search
MVAKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCVDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQEKDIKKEEIIKEEEREKKF
SRRLNHSPPQSSSRYRETRSREERKKDERSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRTRSRSRSRTRSRERDLGKPKYDLDRTDPLENNYTPVPSVTN
ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEEQLEHNSYGRPPLPKKRCRDYDEK
GFCMRGDMCPFDHGSDPVVVEDVNLPGILPFPAQPPVVEGPPPPGLPPPPPILSPPPVNL
RPPVPPPGPLPPSLPPVTGPPPPLPPLQPAGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
SLFATETYDTDAYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPQNKNS
MRIVVDSESRKRSIGAGDGGIPTKKAWFDKQNFNRTNNPGFQKKVQFGNENTKLELRKVP
PELNNISKLNEHFSKFGNLVNLQVAYHGDPEGALIQFATHEEAKKAISSTEAVLNNRFIK
VYWHREGSASQMSATMQKVIQPLVQQPSLPVVKQSVKERLGPVPASNIEPAEAQSASTEV
AQNVTKLSVKDRLGFVSKLPASATEKVLSTSTGLTKTVYNPAALKAAQKSLPVVSTSILD
SNEAQKKKQETLRLQQDVRKKKQEILEKHIETQKMLISKLEKNKPMMKSEDKAEIMKTLE
TLTNSITKLKDELKGVSSGGAPLKSLKTKAQMQKELLDTELDLYKKMQAGEEVAELRRKY
TELQLEAAKRGILSSGRGRGINARGRGASRSRGRGIRGRGRGRGVPVHAVVDHRPRALEI
SAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGSRFKGQDLKL
AWNKPVINMSAVETEEAEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgaaaatgatcatagaaaacttcgaggcgctgaaatcctggctcagtaaaacc
ttggagcccatatgtgatgcagatccatcagccctagctaaatacgttcttgccttggta
aagaaggataaaagtgagaaagagcttaaggcattatgtgttgatcagctggatgtattt
cttcaaaaggagacccagatatttgttgaaaaactttttgatgctgtgaatacaaagagc
tatctacctccgccagagcagccatcgtcaggaagcctaaaagttgaattttttcaacac
caagaaaaagacataaaaaaggaagagataattaaagaggaagagagagaaaaaaagttt
tctagaagactaaatcacagtcctcctcagtcaagctctcggtaccgagaaactagaagc
cgcgaggaaagaaaaaaagatgaacgttctcgcaagagagattatgatcgtaacccccct
agaagggattcatatagagacaggtacaacagaagaagagggcggagtcggagctacagc
aggagtcgaagcagaagttggagtaaggaacgattgcgggaccgggatagggacaggacc
cggagcagaagtagaagcagaacacgaagcagagaaagagatttgggaaagccaaaatat
gatttggatagaacagatccattagaaaacaattatactccagttccgtctgtaacaaac
atttcatctggtcattaccctgtccctacgctgagtagcactattacagttattgctcct
actcatcatggtaataacactactgaaagttggtcagagttccatgaagaacagttggag
cacaactcctatggaagacctccactgccaaagaaacgctgcagagactatgatgaaaag
ggtttctgtatgagaggagacatgtgtccctttgatcatggaagtgacccagtagttgta
gaagatgtgaatcttcctggcatcctgccttttccagcacagcctcctgttgttgaagga
ccacctccgcctggacttcctcccccgccaccaattttaagtcctccacctgttaatctt
agaccaccagtgccacctccaggccctttaccacctagtcttccacctgttacaggacca
cctcctccacttccacctttacaacctgctggcatggatgctcctccaaactcagcaacc
agttccgttcctactgttgttacaactggtattcatcaccagccacctcctgctccaccc
tctctctttgcaacagaaacatatgacacagatgcctataatcctgaagctccaagtata
acgaacacttcaaggcccatgtacagacacagagtgcatgcccaaaggcctaatttgata
ggacttacatcaggtgatatggatctgccccccagagaaaaacctcagaataaaaatagt
atgaggatagtggtggattctgagtccaggaagagatcaattggtgcaggggatggagga
attcctacaaagaaggcttggtttgacaagcaaaactttaacagaacaaacaatcctggt
ttccagaagaaggtgcaatttggaaacgagaatacgaagcttgaattgaggaaagttcct
ccagaacttaacaatatcagcaaacttaacgagcacttcagcaaatttggaaacttagtc
aatttacaggttgcctatcatggtgatccagaaggtgcccttatccagtttgccacccat
gaagaagcaaagaaagctatatcaagcacagaagcagtattaaataatcgctttattaaa
gtctattggcatcgagaaggcagtgcttcacaaatgtcagctaccatgcagaaggtaata
cagcctttagttcagcaacccagtttaccagtagtgaagcagtcggtcaaagagcgatta
ggtcctgtacctgcaagtaatattgagcccgcagaggctcagagtgccagtacagaagtt
gctcagaatgtgactaaattatctgtgaaagataggctgggttttgtgtcaaaacttcct
gcttcagcaacagagaaggtattgtccacgtctactggcttgacaaaaactgtatacaat
cctgctgctttgaaggcagcacagaagtctttgcctgttgtttccacttccattctagat
tccaatgaagcacagaagaaaaaacaggaaacactaagacttcaacaagatgtgagaaag
aaaaaacaggagatcttagaaaagcacattgaaacacaaaagatgctgatttcaaagttg
gagaagaacaaacccatgatgaagtcagaagacaaagcagaaataatgaaaacactggag
actttgactaatagcattaccaagttaaaggatgaattaaaaggtgtctcatctggaggt
gctcctctgaaaagcttgaaaactaaggctcagatgcagaaggaattactggatactgag
cttgatttgtacaagaagatgcaggctggtgaagaagtggctgaactaagaagaaagtac
acagaactgcaacttgaagctgccaaacgagggattctttcttctggtcgtggtagagga
attaatgcacgaggtcggggtgcatcacgtagcagaggcagaggaatacgaggccggggt
cgcggaagaggggttccagttcatgcagttgtggatcatcgaccaagggcactggagatc
tctgcattcacagaaagtgatagagaagatcttcttcctcattttgcgcaatatggtgaa
attgaagattgccagatagacgactcttctctccatgcggtgattacttttaagacgaga
gcagaagctgaagctgctgctgttcatggatctcgattcaaaggacaggatttgaagttg
gcatggaataagccagttattaatatgtctgcggttgaaacagaagaagctgaaccagat
gaagaggaatttcaggaagaatccttggtggatgactcattgcttcaagatgatgatgaa
gaagaagaggataatgaatctcgttcatggagaagatga
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