Trachemys scripta elegans (red-eared slider): 117872509
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Entry
117872509 CDS
T07347
Symbol
TMC2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117872509 (TMC2)
03037 Cilium and associated proteins [BR:
tst03037
]
117872509 (TMC2)
Transporters [BR:
tst02000
]
Other transporters
Pores ion channels [TC:
1
]
117872509 (TMC2)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117872509 (TMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Arc_capsid_dom
Motif
Other DBs
NCBI-GeneID:
117872509
NCBI-ProteinID:
XP_034616902
LinkDB
All DBs
Position
2:80789788..80846751
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AA seq
913 aa
AA seq
DB search
MLCLAVGMEIDGQVESDSESEEAEEGEKATRKQHSKEAIKSSGRERKKQNKNGEEAELEE
KVEAPRQKRTTKKKSHKMNDSDGESEAGEASGKKKRDKKTSSKDQKEAENKEKQTKKKGK
EQDKKQKKNPAESSSSSSASNSSDEESLSEEELTRLKEQVEEKKKLISTMRNKPWRMVKK
LALLREAQAFVEKFEGALGKGKGKKFYAYKMMMAKKWVKFKRDFDNFKTQCIPWEMKIKE
VESHFGSSVASYFIFLRWMYGVNLVLFGLIFGLVIIPEILMGIPYGSIPRKTVPRAEQAT
AMDFSVLWDFEGYIKYSALFYGYYNNQRTIGWLKYRLPMAYFMVGVSVFGYSLMVVIRSM
ARNANENTGDGDDNNFTFSWKMFTSWDYLIGNPETADNKFASITTSFKESIVDEQESNKD
ENIHLRRFLRVLANVLIICCLCGSGYLIYFVVKRSQTFSKMQNIGWYERNEVEIVMSLLG
MFCPPLFETIAALEEYHPRIGLKWQLGRIFALFLGNLYTFLLALMDDVNEKLTEEVVIKN
ITHWTLLSYYNSSAMNDSAVTPPPIDPADMPRGPCWETTVGIEFVRLTVSDIMVTYVTIL
VGDFIRACFVRFVNYCWCWDLEAGFPSYAEFDISGNVLGLIFNQGMIWMGSFYAPGLVGI
NVLRLLTSMYFQCWAVMSSNVPHERVFKASKSNNFYMGLLLLILFLSLLPVAYTIMSLPP
SFDCGPFSGKKRMYDVIQETIKQDFPLFIAKIFSYVANPGLIIPAVLLMVLAIYYLNAVA
EAYQHANTELKKKMQMQRDEEKNKRNNKPTTSSAMQDLDDLLVPSAKSVSQPKPTEENKS
DSTRRNSPAGKEGSMARNSNLTSSGRGEMLAPPPCVTITRPPRPSLRASHHRQSKPGAYQ
QGPYPGMGRGQLH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtcttgcagttggaatggagattgacggacaagtggaaagtgactcagagagc
gaagaggctgaagagggggaaaaggcaaccagaaagcagcactccaaggaagctatcaag
tcaagtggacgtgaaaggaaaaagcaaaataagaatggggaggaagctgagcttgaagag
aaagttgaagccccaaggcaaaaaagaactactaagaagaaaagtcacaaaatgaatgac
agtgatggggaaagtgaagcaggggaagcaagtgggaagaaaaagagagataaaaagact
tctagcaaagaccaaaaggaagcagaaaataaagaaaagcaaacaaagaagaaagggaag
gagcaggataagaaacagaagaaaaacccggcagagagctcttcttcctcatctgcttcc
aactcatctgatgaagagtctctgtcagaggaagaactgacgaggctaaaggaacaggta
gaggaaaagaaaaaactaatatctaccatgaggaacaaaccttggcgtatggtgaagaaa
ttagcattgctcagggaggcacaagcttttgtagagaagtttgaaggagcgttgggaaag
ggaaagggaaaaaaattctacgcatacaagatgatgatggcaaagaaatgggtgaaattt
aagagagactttgacaattttaagacacagtgtataccttgggaaatgaagataaaagaa
gtggagagtcacttcggttcctcagtagcttcttatttcatatttctgcgatggatgtat
ggagtaaatctggtcctttttggtttaatatttggactggttataattccagagatcttg
atgggaatcccatatggaagtatacctagaaaaactgtacccagagctgaacaagctacc
gctatggatttttctgtcctttgggattttgagggttatatcaaatattctgctcttttt
tatggctactacaacaaccaacggacaatcggctggttaaaatacaggctaccgatggca
tacttcatggttggagttagtgtatttggctacagcctgatggttgttataagatcgatg
gccagaaatgccaacgaaaacacaggagatggggatgacaacaatttcactttcagctgg
aaaatgttcactagctgggattacctcattggcaacccggagactgcagacaacaaattt
gcatctattacaaccagcttcaaggagtctattgtggatgagcaagaaagtaacaaggat
gagaacatccatctgagaagattccttcgggttctggcgaatgtgcttatcatatgttgc
ttgtgtggaagtggctacctcatttattttgtggttaaacggtcccagactttttcaaaa
atgcaaaacattggctggtatgaaagaaatgaggttgaaattgttatgtccttgctagga
atgttttgtcctccactgtttgaaaccattgctgccttagaggagtatcatcctcgcatt
ggattgaaatggcagctgggacgtatctttgctctgtttctcgggaacctctataccttt
ttattggccctaatggatgatgtcaatgaaaagctgactgaagaagtagtgataaagaac
atcacacactggaccctgcttagctactataactcatctgcaatgaatgacagtgcggtt
actccacctcccattgatcccgcagacatgcctagaggtccttgctgggagacaactgtg
ggcattgaatttgtaagactcactgtgtctgatattatggtgacctacgtaaccatcctg
gtgggagattttattcgtgcttgctttgtcagatttgtgaactactgctggtgctgggac
cttgaggctggatttccctcctatgcagagtttgatattagtggtaacgtgttgggctta
atcttcaatcaaggaatgatctggatgggatccttttatgcgcctggactggttggtata
aatgtgctgcgcttactaacctccatgtattttcagtgctgggcagttatgagtagcaat
gtccctcatgaacgcgtgttcaaagcatccaaatccaataatttttatatgggactcttg
ctgttgatcctgttcctaagcctactgccagtggcctacaccataatgtccctccctcct
tcctttgactgtggaccattcagtggaaagaaaagaatgtatgatgtcatccaagagacc
atcaagcaggattttccactttttatagccaagatcttcagttatgtggcaaatccggga
ctgattatacctgcagttctgcttatggtcctagccatctactatctgaatgctgtggct
gaagcatatcagcatgctaacacagaactgaagaagaaaatgcaaatgcaacgcgacgag
gagaaaaacaagaggaacaacaaacctactactagttctgcaatgcaagacttagacgac
ttgctggttccaagtgcaaagagcgtgagtcagcccaaaccaacagaagagaacaaatca
gactctaccagaagaaacagccctgcagggaaagaaggaagtatggcaagaaacagcaac
cttaccagctctgggagaggagaaatgctggcaccaccaccttgtgtgacgataacacga
ccgccgaggcctagtttaagggcatctcaccatagacaatcaaaacccggggcttaccag
cagggaccgtaccctggaatgggcagggggcagctgcattaa
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