Trachemys scripta elegans (red-eared slider): 117872728
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Entry
117872728 CDS
T07347
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117872728 (IRX1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117872728 (IRX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
117872728
NCBI-ProteinID:
XP_034617357
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All DBs
Position
2:complement(116841039..116846503)
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AA seq
468 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSERPGVLAAAAAAAAAAAASGRPGGAELGSGSAAVTSVLG
MYASPYSAPNYSAFLPYTADLSLFSQMGSQYELKDNPGVHPATFAAHTAPGYYPYGQFQY
GDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL
KKENKVTWGARSKDQEDGNLFGSDNEGDPEKNEDDEEIDLESIDIDKIDENDGEQSNEEE
EEKSELLRQSSEDEHLEKEKGLSLSASEGLKPKDSFSLVKETSDNSTRIINPNGQNNLQV
PPHSKPKIWSLAETATSPDGALKSSPPPSSHSQVNHTSTQIQHPAFLPSHGLYTCQIGKF
HNWTNGAFLTQSSLLNVRSFLGVNHHHAAHHNHHIQAQQQPSVLTATLGALSSEKPTERT
SPKHIERENAPRTETPPQQLKSPFQPVRDNSLAQQEGTPRILTALPSA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctgggttacccgcagtatctcagcgccagccaggcggtatacggg
agcgagcggcccggggttctggctgccgccgccgccgccgcagctgctgctgctgcctca
ggccggcctgggggtgcggagctggggagcggctcggctgctgtcacttcggtgctgggc
atgtacgcgagtccctacagcgcccccaactacagcgccttcctgccctacaccgccgac
ctcagcctcttctcccagatgggctcccagtatgaactgaaggataatccaggtgtccac
cctgctacctttgctgcccacactgcccctggctattacccctatggacagttccaatat
ggggacccagggcggcccaagaatgccaccagggagagcactagcactctaaaggcctgg
ctgaatgagcacaggaagaacccctaccccaccaagggcgagaagatcatgctggccatc
atcaccaagatgaccctaacccaggtctccacctggttcgccaacgccagaaggagactc
aagaaggagaacaaagtaacttggggagcaaggagtaaggaccaagaagatggtaacctc
tttgggagtgacaacgagggagaccccgaaaagaatgaagacgatgaagaaatcgacctg
gaaagcatagacattgataaaatcgatgagaatgatggggagcagagtaatgaagaagag
gaggagaaatctgagctcctgcgacaaagcagcgaagatgaacatttggaaaaagaaaag
ggtttgtcattgtcagcgtctgaaggtcttaaacccaaagactctttctccctggtaaag
gagacctctgacaacagtacacgaatcataaaccccaatggacagaataatttacaggtg
ccacctcatagcaaacccaagatttggtctttggcagagacagcaaccagccctgatggc
gccctgaagtcttcccctcccccctcttctcattcccaggttaaccacacttccacccag
attcagcacccggctttcctccctagccatggactctacacatgccagattggcaaattt
cacaactggacaaatggggctttcctcactcagagttccctgttaaatgtgaggtctttt
ttgggagtaaaccaccatcatgcggctcatcataaccaccatatccaggcccagcaacag
ccttctgtgttaacagcaaccctgggagccttaagcagtgaaaaacctacagagaggacc
agtcccaaacacatagaaagagaaaatgcaccaagaactgaaaccccaccccagcagtta
aaatcgcctttccagcctgtgcgtgacaactctttggctcagcaagagggaacaccgcga
attttaacagctctcccttctgcttga
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