Trachemys scripta elegans (red-eared slider): 117875986
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Entry
117875986 CDS
T07347
Symbol
TUBGCP6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117875986 (TUBGCP6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117875986 (TUBGCP6)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
117875986 (TUBGCP6)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117875986 (TUBGCP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
117875986
NCBI-ProteinID:
XP_034623536
LinkDB
All DBs
Position
1:complement(37427277..37461934)
Genome browser
AA seq
1775 aa
AA seq
DB search
MESITQLFSDLCEAHMTGLSWKVHLGRQKISKKRAKQNLKRVAYNALFMNLFQEEARKVP
SNISRLPVKNKVLMLSFNLRVGGMGVQADRLEKLVEELETSDCLPFTEINSILDLLVQLV
GSGPPQLLPQKKDYFLNNKYVGRNVKYQGYDYYDVSVFEADIQTLITNEEYQFNDTIQKT
VQIMEAAPGTGLPAIGLFSQNYPIGDKFEKETRVSLFGALVHSRTYDMDIRLDLPPVPDS
ADLSGLAIKVPQSIDQSDDEGFQSASNLTPDSQSEPSMTPDIDLWDAVLTYGPSKRRCWE
RIGCPPGKKEEPYLTEAGREAFDKFYRLREGELELFSNTILQLPQLVLMKEFELVKDVLN
VLIGVVSATFSLNQAAQTFVIKQGIYVSGTSPESMNNLLSEVAEYGTYYTRLSRFSLQPV
LDSLYNKGLVFQAFTSGLRKYLQYYRACVLSTPPTLSLLTISFLFRKLGRQLRYLAELCG
IGTTVLGISRGAGASFPTGVRLLSYLYKEALNNCSNEHYPVLLSLLKTSCEPYTRFIYDW
VYSGVFRDVYGEFMIQVNEDYLSFRDKHYWTHGYILISKEVEDCVPVFLKHIANDVYICG
KTINLLKLCCPRHYICWSDIPVPRISVVFSLEELKEIERDCAVYVGRMERIARYSSISKE
EKDLRMEIAKQELIVHARETASKVLKAINDQQISERMTLDARKREQFQKLKEQFAKDQER
RLTMKQEEIDDDFSYARELREREKRLKALEEELEKKARQELIDHYSKLSDDAARREQRAL
WKIQRHKLETARLNFLLEDQKHIEEMLEKLPDGKYRRKLDIIPHKQCQTVSIMDAVVEEP
SSQVSTVEPVHSDNNVVRGDSESGLKSITSADKPLASPQSVNPHINQHSEPAAAGTEFQL
LSTEQTWDPSQSSNALPESSLNIEDFLPESQEEQPAVVGSLLDEGSLLDEAFQNISSELP
ETTQISESQPLLIGALQGEDNTQLHQQSEYDFNTILRPAAVSQGHGRVGENVFVESRRLQ
WNIHGHVSNASINVGEYVPHAETSQSHSNPYGHSSDSHIKIGEYTSEVESSRPRWNIHGH
VSTAHIKIGEYTSEVEPSRPRWNIHGHASEANIKIGEYVSNIEPTRPRWNIHGHASDANM
KIGENVSEPVPSRPRWSIHGHASDANIKIGENVSEAVLSRPRWNIHGHVSQSHIKMGELV
SDTELSKPRWSPFGHASQSNIKIGEWSPSTETDPIPHNKTISGHSSDSTVQTCLYNGEFS
PTDASKRDDKSSEGKEEVLPQSQSSDSVPILSDSNIEGEKQENITEEREKQAVIAKDVCK
DLPLELPQGSQTEEPEKSIALTVTPQETLLSEACASETKEKEADDDTWKKEQAYLKALSD
QYCLEKYQDSYDLMSELPVSHLLHHVIPRSYTFPVDPLVQSATDETAVQLSELLSLPVLM
KHSITAPLVSHVSLVNKAIVDYYFVELNIEKNFEALRHFLLMEDGEFAQSLSDLLFEKLG
SGQTPGELLNPLVLNSILNKALQYSLHGDTQLASNLSFALKYLPEMFKPNAPDALNCLEL
RYKVDWPLNIVITESCMNKYNKIFSFLLQLKHMVWTLKDIWFHLKRTALVSRASNSVQFR
QLQLYKHEMQHFVKVIQGYIANQILHVTWCEFGNKLSFVGNLEEIHRTHAEYLNKAIFRG
LLTEKATPVMNIIHSIFSLILKFRSQLISQSWNIDAGKQMAVHPNFGLMQQSYNTFKYYS
HFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDN
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atggagagtattacacagctgtttagtgatttgtgtgaagcacacatgacaggtttgtca
tggaaggtccatctgggcagacagaagatcagcaagaaaagggctaagcaaaatctaaaa
agagttgcatataatgccctgttcatgaatctttttcaggaggaggcacgtaaagtgccg
tcaaacatttccagacttccagtgaaaaacaaagttttaatgctgtctttcaacttgaga
gttggcggaatgggcgttcaagcagataggctggagaaactcgtggaggaactggaaaca
tctgattgcttaccatttacggaaattaattctattctggatcttctagtacagcttgta
ggatctggtccccctcagcttctaccacaaaaaaaggactattttctgaacaacaagtat
gttgggagaaatgttaaatatcagggttatgattattatgatgtgagtgtatttgaagct
gatatacagactttaattacaaatgaagagtatcagtttaatgacacaattcaaaagaca
gttcagataatggaggctgcacccggcactggacttcctgccatcggattattttcacag
aactaccctattggtgacaagtttgagaaggaaacacgtgtctcactctttggtgctctt
gtccatagccgtacgtatgacatggacatcaggttggatctgccaccagtacctgacagt
gcggatttgtctggacttgcgattaaagttcctcaaagtatagatcaatcagacgatgag
ggattccaatcagcatccaatctgactcctgattctcaatcggaacccagcatgactcca
gacatagacctctgggacgccgtacttacttatggacccagcaaacgaagatgctgggag
agaattggatgcccacctggtaaaaaagaagaaccatatcttactgaagctggaagagaa
gcttttgacaaattttataggcttcgagaaggggaattagaattatttagtaataccatt
ctccagcttccacagctcgtgctaatgaaagaatttgaactggttaaagatgttttgaat
gtccttattggtgtggtatcagctacattttcacttaatcaggctgctcagacatttgtg
ataaagcaaggtatatatgtatctggaacatcacctgagagcatgaacaatctcctgtca
gaagttgctgaatatggaacatattacacacgattgagtcgcttctctcttcagccagtc
ttagactccttgtacaacaaagggcttgtatttcaggcattcacaagtggattgaggaag
taccttcagtattatcgagcatgtgttttgtcaacacctcccactttaagccttctaaca
atcagttttctcttcagaaaattaggacgacagttaaggtatttagctgagctctgtggc
ataggaacaactgtattggggatcagcagaggtgctggtgcttcatttcctacgggagta
agattgctttcatacctgtacaaagaggctctcaataactgtagtaatgaacattaccca
gttcttctgtcattgttaaaaaccagctgtgaaccatataccaggtttatctatgattgg
gtgtacagtggtgtattccgggatgtttatggcgaattcatgattcaagtgaatgaggat
tatcttagcttcagagataaacattactggacccatggatatattttgatttcaaaagaa
gtagaagattgtgtccctgtgtttctgaagcatattgccaatgatgtatacatttgtggg
aaaaccataaacttattgaaattgtgttgtcccaggcattacatatgctggtcagatatc
cctgttcctcggatttctgttgttttttcccttgaggagctgaaagagattgagagagac
tgtgcagtatatgtcggtcgaatggaaagaattgcccgttacagttctattagcaaggag
gaaaaggatttgcgcatggagattgcgaaacaggagttgattgttcatgctcgagaaaca
gcaagtaaagtactaaaagccattaatgatcaacaaatatcagaaagaatgactttggat
gcaaggaaacgggaacagtttcagaaattaaaagaacagtttgcaaaagatcaagagcgt
cgacttacgatgaaacaggaagagattgatgatgatttcagctatgcccgagagctcagg
gagagagagaaaagactgaaagccttagaagaggaactggaaaaaaaggcaaggcaagaa
ttaattgaccattatagcaaactttctgatgatgcagcccgtagggagcaaagagctttg
tggaaaatccagcggcacaaactggaaacagcccgtctcaactttctattagaagatcaa
aaacacattgaggagatgcttgaaaaacttcctgatgggaagtacaggaggaaattagac
attattccgcataagcagtgccaaacagtctcaattatggatgctgttgttgaagaaccg
agctctcaggtatctactgtggaacctgtgcattctgacaataatgttgtcagaggtgat
tctgaatctggactgaagagtattacttctgctgataaaccattggcttcgccccagtca
gtaaatcctcacattaatcaacattctgagccagctgcagcaggaactgaattccagcta
ctaagtacagaacaaacatgggatccatcacagagttctaatgctcttcctgaatccagt
ctaaatattgaggatttcctaccagaatcacaggaagaacaacctgctgtcgttggctct
ttactagatgaaggatctttactagatgaagcatttcaaaatattagctcagaacttcct
gaaactactcaaataagtgaaagtcagcctcttttgataggagcactgcaaggagaagac
aatacacagttacatcagcaaagtgaatatgattttaatacaattctcaggccagctgct
gtttcacaaggacatggcagagttggagaaaatgtgtttgtggagagtaggagacttcag
tggaatattcatggacatgtatccaatgccagcattaatgtaggggaatatgtgcctcat
gcagagacttcccagtcacattcaaatccatatggacattcttcagattcgcacataaaa
attggggaatatacctctgaagttgaatctagtcggcctcgctggaatattcacgggcat
gtttctacagctcatattaaaattggggaatatacgtcagaggtagagccctcaaggcct
agatggaatattcatggacatgcctcggaagctaatattaagattggcgagtacgtgtca
aacatagagcctacaaggcctcggtggaacatccatggtcatgcatctgatgccaatatg
aagattggggaaaatgtgtcggagcctgtaccgtctagacctcggtggagcatccatggc
catgcatctgatgccaatatcaagattggggaaaatgtgtctgaggctgtactatctaga
cctcggtggaatatccatggacatgtttcacaatcacacattaaaatgggagagctagtt
tcagatactgagctttcaaaacctcgttggagcccttttggccatgcatctcagtcaaac
attaaaataggggagtggtctccatccacagaaactgatccgatacctcataataaaact
atctctggtcactcatcagactctacagttcagacatgtctgtacaatggagaattttct
cccactgatgcaagtaaaagagacgataaatcatcagaaggcaaggaagaggtcttaccc
caatcacagtcctcagacagtgttccaatcctttcagattctaatattgaaggtgaaaag
caagaaaacatcacagaagagagagagaaacaagcagtaattgcaaaagatgtctgcaaa
gatctccctctagagcttcctcagggttcacagacagaggaacctgaaaaatcgattgca
ctgactgttacacctcaagaaactttactttctgaggcttgtgcttctgagactaaagag
aaggaagctgatgatgatacgtggaagaaagaacaagcttatctgaaagccttatcagac
cagtattgccttgaaaaataccaagacagctatgatttaatgtcagagttgccagtttcc
catctcttgcatcatgtgatacccaggtcatacactttcccagtggatcctttggtacag
tcagcaacagatgaaacagctgtacaacttagtgaacttttatctctgccagtgctgatg
aaacactctattactgctccactagtgtctcatgtttcccttgtgaacaaagcaatagtc
gattactactttgtggaactgaacatagagaagaattttgaagcactacggcattttttg
ttaatggaagatggagagtttgctcagtcgcttagtgacctactatttgagaagcttggt
tcagggcaaactcctggtgaacttctgaatccactggttctcaattctatcttaaataaa
gcattacagtatagccttcacggagacacccagcttgcttccaatctttcttttgcactc
aagtaccttccagaaatgttcaaacccaatgctcctgatgctctgaactgcttggagcta
cggtacaaggttgattggcctctgaacattgtcattactgagagctgcatgaataaatac
aacaagatcttctcctttttgctgcagttgaagcacatggtgtggactctcaaggatatt
tggttccacttaaaacgtactgcattagtgagtcgtgcatcaaattctgttcaatttcga
cagctccagctgtataaacatgaaatgcagcactttgttaaagttattcaaggttacatt
gctaaccaaatattgcatgtaacatggtgtgaatttggaaacaaactgtcttttgtagga
aacctggaagaaattcacagaacacatgcagaatacctcaacaaagctattttcagagga
ctattgactgagaaggccactcctgtgatgaacattattcacagcatcttcagtctcatt
ttgaagttccgcagccaattaatctctcagtcatggaacattgatgctggcaagcaaatg
gctgttcatcccaactttggtttgatgcaacaatcttacaatactttcaaatattactct
cacttcttattcaaagtggtaaccaaacttgtaaataggggataccaacctcacctggag
gacttcctgctgcgaatcaactttaataactactacaaagataactga
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integrated database retrieval system
