Trachemys scripta elegans (red-eared slider): 117877768
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Entry
117877768 CDS
T07347
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117877768 (PKD2)
04040 Ion channels [BR:
tst04040
]
117877768 (PKD2)
Cilium and associated proteins [BR:
tst03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117877768 (PKD2)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117877768 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
117877768
NCBI-ProteinID:
XP_034627128
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All DBs
Position
5:complement(23113126..23155528)
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AA seq
918 aa
AA seq
DB search
MAGAGGARAALSSPGGGGGPLELGRIQEPAGGPYSPPPSSCSRQAWSRDNPGFEPEEAAA
GPVLQMEMDVEWGSRGAGSSPGASSARGPAGESDSGRRRRRRGERGVGAAPCPSPAGGDP
LTPHLPPDGAPPSYRTAWAKRLARRLRGLWGTRLMEENTSRERYLKSVLRELITYVIFLV
VLCVLTYGMVSSSMYYYTRVMSQLFLETPLSKMEKTNFKTLSTMEDFWKFTEGPLLDGLY
WEMWYNNKTMAENKSFIYYENLLLGVPRVRQVKVRNGSCSIPEDLKDEIKECYDVYSVAN
EDTAPFGLRNGTAWTYTNEQDLNGSSHWGLIASYSGAGYYQDLSRSREETAAQIANLKKH
LWLDRGTRAAFIDFSVYNANINLFCIVRLLVEFPATGGLITSWQFQPVKLIHYISTFDFF
LAACEIAFCLFTLYYIVEEILEIRIHKLHYFRSLWNCLDILIIVLSVAAIGINMYRRSTV
DMLLKKQLEDQNAFPNFEPLAYWQIQFNNVAAVTVFFVWIKLFKFVSFNRTMNQLSTTMS
RCAKDVIGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECVFTQFRIILGDFNFTEIEE
ANRILGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDMAQQKVEMELSDLIKKGYNKA
MIKLKLKKTTVDDISENLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELT
EHEHQQMRDDLEKEREDLDLDRSSLPRPMSGRSFPRSLDDSEEDDDEDSGHSSRRRGSSS
SGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGRLLDGVTED
ERLGRDNEIHREQMERLVREELERWESDDTASQMSHRLGTPLGLNSQPRSRNSRPSSSQS
TEGIDGSGGGNGGSNIHV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggccgggggcgccagggccgcgctctcctccccgggcggcggcggggggccg
ctggagctggggcggatccaggagcccgcgggcgggccctactcgccgccgccttcctcc
tgctcgcggcaggcctggagccgggacaacccgggcttcgagccggaggaggcggcggcg
gggccggtgctgcagatggagatggacgtggagtggggcagccgcggggccggctcctcc
cccggcgccagcagcgcccggggtccggccggggagtctgacagcggccggcggcggcgc
cggcggggggaacgcggcgtgggggcggctccgtgtcccagccccgctgggggggacccg
ctgaccccacacctgcccccggacggggcccctccgtcctatcgcaccgcctgggccaag
aggctggcgcgccgcttgcgaggtctgtggggtacaagattgatggaagaaaacactagc
agagagagatacctgaaaagtgttttacgagaactgatcacatatgtgattttccttgtg
gtcttgtgtgtcttgacttatgggatggtgagttccagtatgtactattacactagggta
atgtcacagctcttcctggaaacgcctttatcgaaaatggagaaaaccaatttcaaaacc
ttatccaccatggaggacttctggaagttcacagaaggccctttgctggatggtctgtac
tgggagatgtggtacaacaataaaaccatggcagaaaacaaaagtttcatttattacgag
aatctgcttttgggggtgcctcgtgttcggcaggtgaaagtgagaaatgggtcatgctca
atacctgaggatttaaaagatgaaattaaagaatgctatgacgtttattctgttgctaat
gaagatactgctccttttgggctccggaatggaacagcttggacttacaccaatgaacaa
gatttgaatgggagcagccactgggggttgattgcctcatacagtggggctggttattat
caggatctgtcacgaagcagagaggagacagctgcacagattgctaatcttaagaaacac
ttgtggctggatagagggaccagagcagcctttattgatttctctgtgtacaatgcgaac
atcaatctattctgtattgtcaggttattagtggagtttccagcaactggaggcctcatt
acatcttggcagtttcagccagtgaagcttatccactacatttctacttttgatttcttc
ctagcagcctgcgaaatagccttttgtctattcaccctttattatattgtagaagagatc
ttggaaattcgcatccataaactgcattacttcaggagtctctggaattgtctcgatatc
ctcatcattgtgctatcagtagcagctataggaattaacatgtatagaaggtcaacagtg
gacatgttactgaagaagcagctggaagatcaaaacgctttccccaattttgaacctttg
gcatactggcaaatacaattcaacaacgttgctgctgtcactgtgttttttgtctggatt
aagctcttcaaatttgtcagcttcaacagaacaatgaaccagttatccaccaccatgtct
cgctgtgccaaagatgtcattggctttgctattatgtttttcattattttcttagcatat
gctcagctggcttaccttgtgtttggcactcaagttgatgacttcagcactttccaagag
tgtgtctttactcagttccgcatcattttgggagactttaactttacagagattgaagaa
gctaacagaattttgggaccaatttatttcactacttttgtgttctttatgttcttcatt
cttttgaacatgtttttggccattatcaatgatacttattcagaggtcaaatcagatatg
gcccagcagaaagtggaaatggaactgtccgatcttatcaaaaagggatacaataaagcc
atgattaaacttaaattgaaaaaaactactgttgatgacatttcagagaacttgcgacaa
ggtgggggaaagttaaactttgatgaactacgacaggatctcaaggggaagggtcacacg
gatgcagagattgaagcaatatttactaagtatgaccaggatggggatcaggaattgaca
gaacacgaacatcagcaaatgagagatgatctagagaaagaaagagaggatctggatctg
gacaggagctctctaccccgtccaatgagtggtcgaagctttcctcgcagtctggatgac
tctgaagaggacgatgatgaggacagtggacacagctctagaagaagaggtagcagctct
agtggggtttcatatgaagagttccaagtgttggtgagacgagtagatcgcatggaacat
tccataggcagtattgtttccaaaattgatgctgtcattgtaaagcttgaggcaatggag
cgggccaaactgaaaaggagagatgtgttgggaagactgctagacggagttacagaggat
gaaagattgggacgtgacaatgaaatccacagggaacaaatggagaggttagtgcgggag
gaactggagcgttgggaatcagatgacacagcttcccaaatgagccaccgcttgggaacg
ccacttggactgaatagccagcctcgttctaggaattcccgtccatcctcctctcagtca
acagaaggcattgatggaagtggaggagggaatggcgggagcaacatccatgtgtaa
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integrated database retrieval system
