Trachemys scripta elegans (red-eared slider): 117879727
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Entry
117879727 CDS
T07347
Symbol
LCOR
Name
(RefSeq) ligand-dependent corepressor isoform X1
KO
K26260
ligand-dependent corepressor
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117879727 (LCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117879727 (LCOR)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117879727 (LCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4553
Motif
Other DBs
NCBI-GeneID:
117879727
NCBI-ProteinID:
XP_034630861
LinkDB
All DBs
Position
7:125108369..125231778
Genome browser
AA seq
1786 aa
AA seq
DB search
MASPCGRQECSIERRGFRHQLDSWRHKLIHCVGFESILEGLFGPGLLKDLSLFKDCEPEG
VSDWSFDENCLFCCLRREKVKEHLLSLDEPASEAGQEALLRQEQAKIIRFERQAEEFLNA
VFYRKDSPGVSDPNIPLVAREIMQRMIRQFAAEYTSKNSSTQDSSQPNSTKNQSLLKASL
VASSPTAATAQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSL
SHSPASSSTAGNGEDTAETIAIDPNNQPKSPLEKFMVRLCTHHQKQFIRVLNDIYTEAQP
GCEGQPLPESENMDAATCSSGCSQQSTENWKKSAPCSELKPLTSSDSDRDPVGLHSPLRA
AGQPLEHHAEVKSMDRMENFSTAFKRDFSELSITRSSSVSPKDSSTQGYLTTSNSSSLHF
HPGTRSPEGQTTGQEQEAGVRKCEDDKDQIQGKTLADSYIAVKVAHVNGSEDSSDSCLGS
QKNSFKALPEEGWDSGFPVNSPRRADKENALQCSSKASLHQDLETNEEDARPKQENHLHA
LGKTKGGYHTHPGDKNPCEHSKDGWVASAPVPVIHKASSGRSRAKTGSSSVKTARKNKRA
SGLRINDYDNQCDVVYISQPITECHLESQRSVSRRTARKSTRGYYFNGECCELPTVRTLV
KSSRVGERGNGPARRTEALLSAKQSPALSGGEPSEAAQAVGKEADKRASLRLLSKGAPPS
REANERAEKEPSEGGLLKSREAARTEPLLALSAPPCPDNAPEGGSATTQPLAIGPSAAEG
SEEKMCQLLEEANVLQQASSGADLAGDCGPTEDSSREATDSTALSPPEAASREEGSPCSE
IQAVPAPPAGLDPAPPAGLDPTPPLQLPTTMDLVLPTSADLVLHAEPPASMDPEPPAGVD
LELAGALPGEPPTSTDLELPAMTPASMDPETPMEPPASLEAEPLASLQSADVTESIPADP
EADVREVWEGPPEPGEAMPTLAELSGILAGETAPESSRLGERENGDGEMPPGPDTSETDG
KGTVLSKENPEKKQKKGRRALVASDRRLRSQQSQPPTEGSAEKSGSSSSLQLPCLQIKLS
KSPGAKRFRREVHLDGAASVCFPKDCFHKTLLKNIQGPGTGSALERDPVQRGGDENGITT
RQTYKSMLAKEGAAEREGSSKDGPPAKASHSKSGEMLEICVEANSDKRSVLLPRESGTSV
QDAEQSGEKPGDVENPDNAVDAGKVQYKDLTDSPTGPSSKSGSKHVPSKSWKHKKLALPV
YNLRHTPTPVDTAKKNLPGKDVLQANPNQKEEHSSGNKATIDLKEVDTVAEDKPKFVEWC
AEEENQELIADFNAQYMKVQRGWIQLEKEAQPAPKVKNKADKLKEIWKSKKRTRKCRASL
EVQKLSPVQMLFMKAFKLSNICRWFLETTETRSLVIVKKLNTRLPGDVPPIKIPLQKYCS
SSLYPSSLQAERLKKHLKKFAATTPAKNNLKNQKLWARLRENADSTEPGEAASPNQTSPC
EASSEEAGEDRNMQPPPSLPTQASTRILRKYSNLRGKLRAQHRLAKNERKGESAADHPSV
ESKQSRKSVCINPLMSPKLALQVKADVFPAKSVRAEAAVKGRKGKSRSQEDSLPRADPQP
GRKKRTLRESSTVPEPSRSSSTDRLPAKKGSKGKHSEVPPKAPATRKQAVLERSSKLEKK
VSSKEKRVPKRHLGKGRLPVPKVRENPAQRAAPPPSRDGLTKSAKLKPAGEPSTRSQKAA
DKKPSSGKTLTRSMKKIQESSTSQGKRKLRAKVDCSHSKRTRLDAK
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccgtgcgggcggcaggaatgctccattgagaggcgcggcttccgccaccag
ctcgactcgtggcgacacaagctcattcactgtgtagggtttgaaagtattctagaaggg
ctgtttggacctggattattaaaagatctcagtttgtttaaagactgtgagcccgaaggt
gtttctgattggtcttttgatgaaaattgtcttttctgctgcttgagaagagaaaaagta
aaggaacacctactcagtctggatgagccagcttcagaagctgggcaagaagctctactt
agacaagagcaagcaaaaatcattcggtttgagaggcaagcagaagagttcctcaatgca
gtcttttacagaaaagacagtcctggggtctctgaccccaatattcccctagtggcccgg
gagatcatgcagcgaatgatccgacagtttgctgctgaatatacctcaaaaaatagctct
actcaggactccagccagcccaatagcacaaagaaccaaagcctgctgaaagcatctctg
gtcgcctcctctcccacggctgcaactgctcagaaccctgtgctcagcaaacttctcatg
gctgaccaagactcgcctctggaccttactgtcagaaagtctcagtcagaacctagtgaa
caagacggagtgcttgatctgtccactaagaaaagtccttgtgccggcagcacctctctg
agccattctccagccagctccagtactgcagggaatggtgaggatacagcggagacaata
gcaatagatcctaacaatcagccgaagtctcccctggaaaagtttatggtcagactgtgt
acacatcaccagaagcaattcattcgtgtgctaaacgacatatacacggaagcacagcca
ggctgcgagggccagccgttacctgaatctgaaaacatggatgcagccacttgcagctct
ggttgtagccagcaaagcactgaaaattggaagaagtctgctccctgttctgaattgaag
cccctaacttcctcagactcagacagagacccagtgggtcttcatagccctctacgtgct
gcaggacaacccttggagcatcatgcagaggtgaaatccatggacaggatggagaatttc
agtactgctttcaaaagagacttctctgaactctccattactagaagtagttctgttagt
ccaaaggatagttccacccaaggatacctcaccacttcgaactcttcctcactccacttc
catcctggcaccaggagcccggaaggacaaaccactggacaggagcaagaggctggtgtc
agaaagtgtgaggatgacaaagaccagatccaaggcaagaccttagcagacagctacatt
gctgtaaaagtggcccatgtgaacggcagtgaggacagctcagacagctgcctggggtct
cagaagaactctttcaaagctttaccagaagagggttgggattcagggtttccagtgaac
tctcctagaagagctgacaaagagaacgctttacagtgcagctccaaagcatctttgcac
caggatttagaaacaaacgaagaagatgcaagaccaaagcaagaaaaccatctccatgcc
ctgggaaagactaaggggggctaccacacccatcctggcgacaagaatccatgtgagcat
tccaaagacggatgggtggcctctgcaccagtgccagtgatacacaaagcctccagtggg
cgctcaagagcgaagacagggtcctcatccgtcaaaacagctcggaagaataaacgggca
tcgggactgagaataaatgactatgacaaccagtgtgacgttgtctatatcagccagcca
ataactgaatgccacctggagagccagcgctcagtgtcccggaggacagctcggaagagc
acccgcgggtattatttcaatggtgagtgctgtgagctgcccactgtccgcacgctggtg
aaaagctcccgagtgggggagagaggaaacggtccagcacggaggacggaagcattactg
agcgctaagcagagcccggcgctctctgggggcgagccttcggaggcagcccaagctgtg
gggaaagaggctgacaaaagagcgtccctcaggctcctgtccaaaggggctccccccagc
agagaagctaacgagagagcagaaaaggagcccagcgagggcggcttgctgaagtcaaga
gaagctgctcgcactgagccactgctggctctgtctgctcccccctgccctgacaatgca
ccagaaggcggctcggccaccacgcagcctctagccatcggcccctctgccgctgaagga
agcgaggagaagatgtgccagctgctggaagaggcaaatgttctccagcaagctagcagc
ggtgctgacctcgctggggactgtgggcccacagaagacagcagcagggaggctacagat
tcgacagctctttctccaccagaagctgctagtagggaggaaggttctccatgctcagaa
atacaagctgttccggcgcctcctgccggcctggacccagcgcctcctgctggcctggac
ccaactcctcctttgcagctccccaccaccatggacctagtgcttcctaccagtgcagac
ctggtgctccatgcagagcctcctgccagcatggaccctgagccgcctgctggagtagac
ctggagctggctggggcacttcctggagagcccccaactagtacagacctggagcttcct
gccatgacccctgccagcatggacccagagactcccatggagccccctgcgagtttggag
gccgagccccttgctagcttgcagtctgccgatgtgactgaaagcattcctgctgaccca
gaagctgacgtaagggaggtgtgggaaggcccgcctgagccaggggaggccatgccgact
ctcgcagaactcagtggaatcttggcaggcgagactgccccagagagcagcaggctgggt
gagagagagaacggcgatggtgaaatgccaccaggacctgacacttcagaaacggatggt
aaagggaccgtcttgtccaaagaaaacccagagaagaagcaaaagaaaggcaggagagcg
ctcgtagcatcagaccggcgtctccgcagccagcaatcccagccacccacggaaggcagt
gctgaaaagtctggttcttccagctctctgcagcttccctgtcttcagattaagctttct
aaaagtcccggtgcaaagcggtttaggagggaggtgcaccttgacggagcagcatccgtg
tgcttcccaaaggattgcttccacaaaacactgctgaagaacatccagggcccaggcacc
gggagtgcccttgagagagatcccgtgcagcggggaggagacgaaaatggcattactact
aggcaaacctataaaagcatgttggcaaaagagggtgcagcggagagagaagggtcatcg
aaagatggcccccctgctaaagccagccatagtaagtcaggggagatgcttgagatctgt
gtagaggctaattctgataagagaagtgttctccttcctagggaaagtggaacaagtgta
caggacgcagagcaatcgggtgagaaaccaggtgatgtggagaacccagacaatgctgta
gatgctggaaaggtacagtataaagatctgactgattcgcctacaggtcccagtagtaaa
agtggaagcaaacacgtcccatccaagtcttggaagcataaaaagttggccctcccagtt
tacaacttgagacacacccctacacctgtggacactgcaaaaaagaatcttccagggaag
gacgttctgcaagccaatccaaaccagaaggaagaacacagttcagggaacaaagccacc
atagatttgaaggaggtggacacagtggctgaggacaaaccaaagtttgtggagtggtgt
gctgaggaagagaatcaggaacttattgctgactttaatgcccagtatatgaaagttcag
agaggctggattcagttggaaaaagaagcgcagccagcccccaaagtaaagaacaaagct
gacaagctgaaggagatttggaaaagcaagaaaagaacccggaaatgtagagcgtctctc
gaagttcagaagctctcccctgtccagatgctgtttatgaaggccttcaagttatccaac
atttgccgttggttcttggagaccactgaaaccaggtcactagtcattgtgaagaaactc
aatacccgtctcccaggagatgtcccccccatcaagatccctctgcagaagtattgttct
tccagcctgtatcccagctcactgcaagctgaacgcttgaaaaaacacctcaagaaattt
gctgcaactacccctgctaaaaataacttgaagaatcaaaagttatgggccaggctccgg
gagaacgctgacagtacggagcccggggaagctgccagtcccaaccagacgtctccttgt
gaggctagctcagaagaagctggtgaagacagaaacatgcagccccctccaagtctgcca
acgcaggccagcactaggattctgcggaaatactccaatctgaggggcaaactgcgagcc
cagcaccgcctggcaaagaatgaaagaaagggggagagtgcagctgatcatccctcagtg
gaaagtaagcaaagccggaagagcgtctgcatcaacccgctgatgtctccaaagctggcc
ttgcaggtcaaagccgatgtgtttcctgcgaagtccgtgcgagcggaagcagcagtgaag
ggaagaaaagggaaaagcaggtcccaggaggactccttgcccagagctgaccctcagcca
ggcagaaagaagagaacgctgcgggagagcagcactgtgccagagccgtctcgctcctcc
agtacagacaggctgccagctaagaagggcagcaaaggaaaacattccgaggttcccccg
aaagcgcctgctaccagaaagcaggctgtcctggaaagaagcagtaagctcgagaaaaag
gtgtcttcgaaagagaagagagtcccgaaaaggcaccttggcaaaggcagactccccgtc
ccgaaagtcagagagaaccccgcccaaagagctgcacccccgcccagccgggacgggctc
accaaatctgcgaagctgaaacccgcgggggagccctctaccaggtcacagaaagcagcc
gacaagaagcctagcagtgggaaaactctgaccaggtctatgaagaaaattcaagagagc
agcacgtcccagggcaagagaaagttaagggcaaaagttgactgttcacacagcaagcga
acacgactggatgcaaaataa
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