Trachemys scripta elegans (red-eared slider): 117881172
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Entry
117881172 CDS
T07347
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117881172 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117881172 (LAMC1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Alanine_zipper
DUF4085
Motif
Other DBs
NCBI-GeneID:
117881172
NCBI-ProteinID:
XP_034633949
LinkDB
All DBs
Position
8:54630228..54761883
Genome browser
AA seq
1594 aa
AA seq
DB search
MGRGVLPLLLLLELAGRCAAAMDECVDEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDAAQPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCENTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSAVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNDFGKLSCNCKHNTFGED
CEKCLPFYNDRPWRRATAESANECLSCNCNGRSQECYFDAELYRSTGHGGHCIGCFDNTD
GANCERCRENFYRLGSEEGCLPCNCNAVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFH
SLSEAGCRLCSCNPAGSTDDCSIETGRCTCKDNVEGFHCERCKPGFFNLDPANLRGCTPC
FCFGHSSVCTNAVGYSIYSIVSNFQTGEEEWRAEQRDGSEILLRWSVETQDISVISDSYF
PIYFIAPGKFLGNQVLSYAQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSY
PSENTVKYAFRLHEATDYPWRPSLTPFEFQKLLYNLTSIKIRGTYSERSAGYLDDVTIVS
ARPEPGTPATWVESCTCPAGYHGQFCEHCAPGYRRETPSLGPYSLCVLCTCNGHSESCDP
ETGACDCRDNTAGPHCEKCSDGYYGDATTGISSDCQPCPCPGGSSCAVVPKTKEVVCTNC
PAGTTGKRCELCDDGYFGDPLGENGPARLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYN
TAGFYCDRCKDGFFGNPLASSPEVKCKACSCNPYGTVNQQTNCNQVTGQCECLPRVTERD
CSACEPGFYNLQSGRGCDRCDCHPLGSTDGHCDIQTGQCECQPGITGQRCERCEVNHFGF
GPEGCKPCDCDTEGSRSLQCKEDGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACY
RLVRDKVAEQRERLQELENLIANLGTGDETVTDQAFEDRLKEAERDVMDLLRDAQNSKDV
DQGLMDRLKEINSTLASQLGRLQNIQNTVRETEGLAEQARDRVESTEDLIEVASNMLEKA
KMAVANVSITPPVSNGDPNNMTLLAEEARKLAERHKQEADDIVRIAKAANDTSTEAYTLL
LKTLAGENQTASDIDELNRKYNQAKNISRDLEKQANKVHAEAEEAGNKALQIYANLTSLP
AVDSKGLENEANKIKKEAEELDQLIDRKLKDYEDLREDMKGKELEVKNLLEKGRTEQQTA
DQLLARADAAKALAEEAAKKGRETLEEANDILSNLRDFDKRVNDNKTAAEGALKKIPAIT
RTIAEANNKTRQAELALGNAADDAREAKNKADDAEKIANSVQKNAASTKSEADKTFSDAT
ELDKEVDDMLKQLQDAEKELKRKQEDADQDMMMAGMASQAAQEAEDNARKAKNSVNSLLT
IINDLLGQLGQLDPVDLNRLNEIEGTLNTAKDQMKDSDLDRKVTELEDAARRQDEAIQAY
NRDIEDILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcggggtgctgcctttgctgttgctgttggagctggccgggcgctgcgccgcc
gccatggacgaatgcgtggacgaggcgagcgggcggccgcagcgctgcatgcccgaattc
gtgaacgccgccttcaacgtgaccgtggtggccaccaacacgtgcggctcgccggccgag
gagtactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgatgcc
gcccagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggccgacacc
acctggtggcagagccagaccatgctggctggggtgcagtaccccagcgccatcaacctc
accctgcacctgggaaaggcctttgacatcacatatgtgcgcctgaagtttcacaccagc
cggcctgagagctttgctatctacaaacgtaccagggaagatggtccgtgggtaccttac
cagtactatagtggctcttgcgagaacacgtatcagaaattaaaccgaggctttatccgg
actggggaggatgaacagcaggcactctgcacggatgagttcagtgacatctctccactc
acaggtggcaatgtggctttttcaacactggaggggcggcccagtgcctacaattttgac
aacagtgctgtgttacaggaatgggtgacagctactgacatccgagtgaccctcaatcgt
ctgaacacctttggagatgaagttttcaatgatccaaaagttctcaagtcctattattat
gcaatttctgattttgctgtgggtggcaggtgcaagtgcaatggccatgcaagcgagtgt
gtgaagaatgactttgggaagctatcgtgtaactgcaaacacaacacttttggggaagac
tgcgagaagtgccttcccttctacaatgacaggccatggagaagagcaacagcagagagt
gccaatgaatgtttgtcctgtaactgcaatgggcggtcacaggagtgttactttgatgct
gaactgtaccgctccacgggccatggtggtcactgcattggctgcttcgataacactgat
ggtgccaactgtgaaaggtgccgggagaacttctatcgccttggaagtgaggaaggatgt
ttaccatgtaactgtaatgctgttggctctctcagcactcagtgtgataactacggccgg
tgcagctgcaaaccaggagtgatgggagataaatgtgaccgatgccagccagggttccat
tccctctcagaggctgggtgcaggctatgttcatgcaatcctgctggcagcacagatgac
tgcagtatcgaaacagggcgatgtacctgcaaggacaacgtggagggattccactgtgag
agatgtaaacctggatttttcaatctggatccagccaatctgaggggctgcaccccttgc
ttctgttttggtcactcctcggtctgcaccaatgccgttggctacagtatctacagcatc
gtctccaacttccagactggggaggaagagtggcgtgctgaacagcgagatggctctgaa
attttactccggtggagtgtggaaacccaggacatctctgttatctcagacagctatttc
cctatctatttcattgcaccgggcaagtttttgggcaaccaggttttgagttatgctcaa
aatctgaccttctcctttcgggtggataggcgggacactcgtctttctgcagaggacctg
gtgcttgaaggggctgggcttagagtatctgtgcctcttattgctcagggcaattcctat
cctagcgagaacacagtgaagtatgccttcaggctccatgaagcaacagattacccgtgg
aggccttctcttaccccatttgagtttcagaagctgctttacaacttgacttctatcaag
atccgtggaacatacagtgagagaagtgctggatacctggatgatgtcactattgtgagc
gctcgtcctgagcctggaacccctgcaacctgggtggagagctgcacttgcccagcagga
taccatgggcaattctgcgagcactgtgccccaggttataggagggagacacctagcctt
gggccatacagtctgtgtgtgctgtgtacctgtaatgggcacagtgagagctgtgaccca
gagactggtgcttgcgactgcagagataatactgcaggccctcactgtgagaagtgtagt
gatgggtattacggagatgcaactacaggcatttcctcagactgtcagccatgtccgtgt
ccagggggctccagttgcgccgtagtgcccaagactaaggaggtggtgtgcaccaactgt
cctgctggtaccacaggtaaaagatgtgagctatgtgatgacggctattttggagatcca
cttggtgaaaatggccctgccaggctttgccgtctctgccagtgcagtgacaacattgat
cccaatgctgtggggaactgtaaccgcttgacaggggaatgcctgaaatgcatctacaac
acagctggcttctactgtgaccggtgcaaagatggtttttttgggaaccccttagcctcc
agccctgaggttaaatgcaaggcgtgcagttgtaatccttatggcacagtaaaccagcag
acaaactgcaatcaagtaactgggcagtgtgagtgcctgccacgtgtcactgagagggac
tgtagtgcctgtgagcctggcttctacaacctacagagtggacgtggctgtgacaggtgc
gactgccatccgctgggttccaccgatggccattgtgacatacaaacagggcagtgtgag
tgtcaaccaggcatcaccgggcagcgctgtgagagatgtgaggtcaaccacttcggattc
ggacctgaaggctgcaaaccatgtgactgtgacaccgagggctctcgctccctgcagtgc
aaggaggatggtcgctgtgaatgtaaggaaggctttgtggggagccgttgtgaccagtgt
gaagagaattatttctacaatcggtcctggcctggctgtcaagaatgtcctgcgtgctat
agactggttagagataaggtggcagaacaacgcgaaaggttgcaggaactggaaaatctt
atagcaaaccttggtacaggagatgaaacggtgactgatcaggcctttgaggacagactg
aaggaggcagagagagatgtcatggacttgctccgagatgcacagaacagcaaagatgtg
gatcagggcctgatggatcgtctcaaggaaattaacagcactctggcaagccagcttggc
cgattacaaaacatccaaaatacagtgagggagactgaaggcctagctgagcaagcccga
gaccgggtggagagcacagaagacctgattgaagtagcttctaatatgctagagaaggca
aagatggcagttgccaatgtgtccattaccccaccagtctccaatggtgacccaaacaac
atgactctcttggcagaagaggctcgtaaactggctgaacgacacaaacaagaagctgac
gatattgtgcgcattgcaaaggcagcaaatgatacatctacagaggcgtatacattgcta
ttgaagacactggcaggagagaaccaaactgcgagtgacatagacgagctcaacaggaag
tataatcaagcaaagaacatttctcgagacctagagaaacaggctaacaaggtgcatgcc
gaggcagaggaagctgggaacaaggccctgcagatctatgctaatctcaccagtcttcct
gctgtggactccaagggtctagagaatgaggcaaataagatcaagaaggaagcagaggag
ctggatcagctcattgacaggaagttgaaggattatgaggatttgagagaggacatgaaa
gggaaggagctggaagtgaagaatctcttggagaaaggaaggactgaacaacagactgcc
gaccagctgctggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaag
ggaagagagacgctagaggaggccaatgacattctcagcaacctgagagattttgacaag
cgtgtgaacgataacaagacagccgccgagggggcgctaaagaagattcctgccattact
cgaaccattgctgaggccaataataagacaaggcaagcagagctggcgcttggtaatgct
gctgatgatgccagggaagccaagaacaaagcagacgatgctgagaaaattgctaattct
gtccagaagaatgctgccagtacaaagtctgaggccgacaagactttctctgatgcgaca
gagctagacaaagaagtggatgacatgctgaaacagctgcaagatgcagagaaggagctg
aagaggaagcaggaggatgctgatcaggatatgatgatggcaggcatggcttcacaggct
gcccaagaggcagaagacaatgcgagaaaagctaagaactctgttaacagcttgctcacc
atcattaatgaccttctgggacagttagggcaactggacccagtggacttgaacagactg
aatgagatcgagggtaccttgaacacagccaaagatcagatgaaagatagtgacctggac
cggaaagtgaccgaattggaggatgcagccaggcggcaggacgaagccatacaggcctac
aacagggacattgaggatatcctgaaagacattaacaacctggaagatatcaagaagacc
ttgccgtctggctgtttcaacaccccgtccatcgagaaaccctaa
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integrated database retrieval system
